NONHSAT126240
Revision as of 06:57, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT126240 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
870 nt |
Genomic location |
chr8+:41435707..41456444 |
Exon number |
3 |
Exons |
41435707..41435797,41442292..41442436,41455811..41456444 |
Genome context |
|
Sequence |
000001 GCACGTCCTG ACGCAGCTTG GGCCCGCGGC GGCGGCAAGG GCGGGAGGGA GCGGTCGCCG CGGGATTTGG AGCTGCCTAG 000080
000081 CCTCGCGGTC GCTTCAAGAG ATGGTTCCGT TGCTTTGGGG TGAACTTGGT ACCAGTGCCG TGTTACTTAT CCAGTTCTAA 000160 000161 CTCAAGAAAG TTCTGGAGGG CATAATGATC TTAGATAAGA CCAAGGCCCC GAACCTGACC ATGTTCTGTC TTCTCTCTTT 000240 000241 GGCAGCATGT AAGCAGCTGT TTGCCAAGAA CCCAGGTCAC TGCTAAGAAA GGGTGCCTTC GGGAGAAGAG TGTCCAGAGG 000320 000321 ATACCAATGC CAGATGCATC TGGAGTTACA CTCAGCACTC GCAGTATGAG ACATTGTGTG CCAGCATCTC TTTCCTTCTG 000400 000401 GCAAAGACTG TAGCTCTCCA GGTAGGAGGA TCCTGGAAGC TGTGAGCACC AGGAGCCTTG CCAGAGGAGG ATGGGGCCAG 000480 000481 ATATGAACTC TCTACCATGA ACATGGTTCT CGGCTTATGA AGGAATTTTA AGTAAAACAG TTATTTAATT TCCACATATT 000560 000561 CAAGTCAAAA GCCTTCTGTG TGAAGTGCCA GTGATTACCC CTCCACAGGA GTTATCAGGA TTTTTCTGGC ACCAAGTTTA 000640 000641 ATTCTTCTTC GTACTTCTGG TAGTGACAGA TCTGCAGGAC AGATTTATCT GTTGAATGCT CTTGGGCAGG AAAACCATGT 000720 000721 AAAACCTCTG GAAGCAGCAT CAGGACAGCA GAGCAGAGCC CCCGTCCTCA CTGCTCACTT GCACAGAAAC TCCATCTGGA 000800 000801 CTCGGATGCT TTTACTGAAG ACCCATCTAG CTTCAATCAT CTTTAGAGTC CATCCATTCT GGAGAGACCT |
Predicted Small Protein
Name | NONHSAT126240_smProtein_326:412 |
Length | 29 |
Molecular weight | 3134.6135 |
Aromaticity | 0.0714285714286 |
Instability index | 50.5535714286 |
Isoelectric point | 10.2560424805 |
Runs | 7 |
Runs residual | 0.0467806841046 |
Runs probability | 0.0206424912307 |
Amino acid sequence | MPDASGVTLSTRSMRHCVPASLSFWQRL |
Secondary structure | LLLLLLEEELLLLLLEEELLLLHHHHLL |
PRMN | - |
PiMo | - |