NONHSAT126240

From LncRNAWiki
Revision as of 06:57, 17 October 2014 by 124.16.129.48 (talk)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT126240

Source

NONCODE4.0

Same with

,

Classification

sense

Length

870 nt

Genomic location

chr8+:41435707..41456444

Exon number

3

Exons

41435707..41435797,41442292..41442436,41455811..41456444

Genome context

Sequence
000001 GCACGTCCTG ACGCAGCTTG GGCCCGCGGC GGCGGCAAGG GCGGGAGGGA GCGGTCGCCG CGGGATTTGG AGCTGCCTAG 000080
000081 CCTCGCGGTC GCTTCAAGAG ATGGTTCCGT TGCTTTGGGG TGAACTTGGT ACCAGTGCCG TGTTACTTAT CCAGTTCTAA 000160
000161 CTCAAGAAAG TTCTGGAGGG CATAATGATC TTAGATAAGA CCAAGGCCCC GAACCTGACC ATGTTCTGTC TTCTCTCTTT 000240
000241 GGCAGCATGT AAGCAGCTGT TTGCCAAGAA CCCAGGTCAC TGCTAAGAAA GGGTGCCTTC GGGAGAAGAG TGTCCAGAGG 000320
000321 ATACCAATGC CAGATGCATC TGGAGTTACA CTCAGCACTC GCAGTATGAG ACATTGTGTG CCAGCATCTC TTTCCTTCTG 000400
000401 GCAAAGACTG TAGCTCTCCA GGTAGGAGGA TCCTGGAAGC TGTGAGCACC AGGAGCCTTG CCAGAGGAGG ATGGGGCCAG 000480
000481 ATATGAACTC TCTACCATGA ACATGGTTCT CGGCTTATGA AGGAATTTTA AGTAAAACAG TTATTTAATT TCCACATATT 000560
000561 CAAGTCAAAA GCCTTCTGTG TGAAGTGCCA GTGATTACCC CTCCACAGGA GTTATCAGGA TTTTTCTGGC ACCAAGTTTA 000640
000641 ATTCTTCTTC GTACTTCTGG TAGTGACAGA TCTGCAGGAC AGATTTATCT GTTGAATGCT CTTGGGCAGG AAAACCATGT 000720
000721 AAAACCTCTG GAAGCAGCAT CAGGACAGCA GAGCAGAGCC CCCGTCCTCA CTGCTCACTT GCACAGAAAC TCCATCTGGA 000800
000801 CTCGGATGCT TTTACTGAAG ACCCATCTAG CTTCAATCAT CTTTAGAGTC CATCCATTCT GGAGAGACCT
[back to top]

Predicted Small Protein

Name NONHSAT126240_smProtein_326:412
Length 29
Molecular weight 3134.6135
Aromaticity 0.0714285714286
Instability index 50.5535714286
Isoelectric point 10.2560424805
Runs 7
Runs residual 0.0467806841046
Runs probability 0.0206424912307
Amino acid sequence MPDASGVTLSTRSMRHCVPASLSFWQRL
Secondary structure LLLLLLEEELLLLLLEEELLLLHHHHLL
PRMN -
PiMo -