NONHSAT126268
Revision as of 06:57, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT126268 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
578 nt |
Genomic location |
chr8-:42027128..42029225 |
Exon number |
2 |
Exons |
42027128..42027682,42029203..42029225 |
Genome context |
|
Sequence |
000001 CTAGCTGGCA CTGAACACTC ACAGGCGACA GATGGAAAAG TTTCCGACCA ACGGGAAGGT TACGATCTGG TACCAGTCCA 000080
000081 GCACTGACAA ATGGAGATAT GAGCTCACTC ACTCACAGCT GTGCTCACCT TCATGGGAAG AGTCGGCCCT CTACTCCAGT 000160 000161 ACGATGACAC ACAAACCCTG GCTGCACTGG GGATTATGGG ATCGGCTTCT CTGAAACTCT CTTACTTTTT AAAAATCCTG 000240 000241 TAGAAGGATC AGGTAACAGG AAAATGGCCG GTGAATTCTG TAAAAGGAAG TGAGTAGAAC TGTTTTGGGT TAGAAAAGAA 000320 000321 GCACTTTAGG CAGCCACCAT GGGAAGAAGG CGGGTCACCT TCTCACTGAA GATAAGAGAC CAAGTGCTGA TGGACAGCAA 000400 000401 CAGGCAGTGT CTGAAAACTA GTCCGATACC ATCATGGTCT TTGAGGGAAA ATCTGATTCC ACTGGGGTTT CCATGTCAAT 000480 000481 AGTGGACTCA AATTTAAAAA GTCTCCAGTC CATTTCCAGA AGTACAAGTG TTTTCTACAT GAGTAGAGGA ATCAGAAAGA 000560 000561 AACCAACTCA ACTCTTTC |
Predicted Small Protein
Name | NONHSAT126268_smProtein_338:481 |
Length | 48 |
Molecular weight | 5489.4291 |
Aromaticity | 0.063829787234 |
Instability index | 55.8553191489 |
Isoelectric point | 10.762878418 |
Runs | 7 |
Runs residual | 0.0173404255319 |
Runs probability | 0.0345976228329 |
Amino acid sequence | MGRRRVTFSLKIRDQVLMDSNRQCLKTSPIPSWSLRENLIPLGFPCQ |
Secondary structure | LLLEEEEEEEEELLLEEELLLLLLLLLLLLLLLLHHHLLLLLLLLLL |
PRMN | - |
PiMo | - |