NONHSAT126555
Revision as of 06:58, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT126555 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
808 nt |
Genomic location |
chr8-:53118976..53159224 |
Exon number |
7 |
Exons |
53118976..53119310,53124639..53124669,53126763..53126817,53133301..53133408,53134200..53134353,53142592..53142637,53159146..53159224 |
Genome context |
|
Sequence |
000001 AGCCCCCAAT TTTGTGAGTG TCCCTGAAGC ATTGTGACAA TTCCATTTTA TGTGTCTGCG TGCTCATATC AAGACTAAGG 000080
000081 AGTGATGGAA ACTCTCCAGT TCAGATCCAG TAGCTTTTAG GGAAGGAACT ACAGTTGCTG ACTTAAGTTG AAGAAGCATC 000160 000161 TATTTAATGT CTGGTCAAAT CCTACAAGAA ACACAGAAAT CTATGATTAA AAAGCTGAGC ACTTTGATAT ACTGCAAAGG 000240 000241 GTAGAGAAGG CAGGACGGTA GAAATTTTCT GCAAGAAAGA ATGAATTTCA GGATTTATCA CTAAATAAGA CAAAGTCATT 000320 000321 TATTTAGTCC CCCTGACACA GCAGGGCAAA CTGAGTTGAC ATACAAGTTA CCTGGAGAAA AAGAGAGATG GATGCAGAGG 000400 000401 CTGAAGATAA AACGCTGCGT ACTCGCTCTA AAGGAACCGA GGTGCCAATG GATTCACTAA TCCAGGAGCT CAGGCCAGAC 000480 000481 CTGAACATTA GAATCCAAGA AACTGACACC TTCAAGAAAA CCCTTTTTAC CTATAAGCCA CTTTGAGAGG GACTCAAGAC 000560 000561 TGATCACCCA AGAAGCTGAT GATAAAAATT AATTTAGAAG AGAAGTGTCC CTCCAGGGTG TGGCAGAGGC ATCTGTAGGG 000640 000641 TTCAGCCACC CCGGCATCGG CCTTGTCCAT GCCTCTGTGT GATGGAGGGG CTCCGTGTGG AACATGAGGC TGGAGGCCTC 000720 000721 ACACCAACAG AAGCATTCCA GAGATTATTT TATGTTTACT GTACTGTTCT TACTAGGGCA GAAAAGTGTC TTAAAATATA 000800 000801 TTGGGGAA |
Predicted Small Protein
Name | NONHSAT126555_smProtein_578:637 |
Length | 20 |
Molecular weight | 2380.8331 |
Aromaticity | 0.0526315789474 |
Instability index | 58.2421052632 |
Isoelectric point | 9.30230712891 |
Runs | 5 |
Runs residual | 0.0123839009288 |
Runs probability | 0.0457516339869 |
Amino acid sequence | MIKINLEEKCPSRVWQRHL |
Secondary structure | LLEELLLLLLLHHHHHHLL |
PRMN | - |
PiMo | - |