NONHSAT126568
Revision as of 06:59, 17 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT126568 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
575 nt |
Genomic location |
chr8-:53320225..53322439 |
Exon number |
3 |
Exons |
53320225..53320476,53321888..53322012,53322242..53322439 |
Genome context |
|
Sequence |
000001 CGCTTGTTCG CTCACTCTCA GTGAAAAGAG TTTTGAAATG AGTTCTGAAT AGACAGCATT TTCTTTGTGC GGTTGGTAAA 000080
000081 TAACACAGAG CAAAGTTAGC AAGTTGCAGC GCCTCTGCGT TCTGATTCTA TGGAACCTTT TTGTAGGGAG AAGGGCAGGA 000160 000161 TGTTTTTAAC TGAATGTGAC CTCAGGGGAA TACTAGAGAA AATAATAAAA TTTCTGAATG GGGCAGCGTG GAGAAATCCT 000240 000241 AAGAGAAATA GCATAAGAGC ATTTTGGAAC ACATCCAGGA AAAGATAACT TTCGACACAC CTGTAGACGT TCGCCAGGTA 000320 000321 AAGGAAATCC AGGCCCTTGA GCAATGTATT GATGAATTGG GGTGGAAATG GAGGAGGATG GAAACGATGG CGGCACTGGA 000400 000401 CTGTTTTCCA GAAACCATTT ACACAGGCTC ACCAGAAGAG GGCAGCGCAG AGCAATGAAC TCTCCGAGGA GTTTCCAAAC 000480 000481 AGATGTCTTG AAACTTAAAG TGAAAATCTC TGCATGAAAG TAGCCGTTTT TGGACAGCGT CCTCCACCAA AACCATATAT 000560 000561 CTCTAAAATA ATAAT |
Predicted Small Protein
Name | NONHSAT126568_smProtein_377:457 |
Length | 27 |
Molecular weight | 2808.032 |
Aromaticity | 0.0769230769231 |
Instability index | 65.4538461538 |
Isoelectric point | 3.39617919922 |
Runs | 5 |
Runs residual | 0.0169946332737 |
Runs probability | 0.0389683801449 |
Amino acid sequence | METMAALDCFPETIYTGSPEEGSAEQ |
Secondary structure | LLLHHHHLLLLLLEELLLLLLLLLLL |
PRMN | - |
PiMo | - |