NONHSAT126791
Revision as of 06:59, 17 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT126791 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
690 nt |
Genomic location |
chr8-:59502081..59506859 |
Exon number |
3 |
Exons |
59502081..59502633,59503426..59503493,59506791..59506859 |
Genome context |
|
Sequence |
000001 TTTTGAGCAG AGCAGTTACT GGAATCACGG TCTCTCGCAA TGGATCTTCA GTATTCACAA CATCCCAAGA TTCCACCTTG 000080
000081 AAGATGTTTT CTAAAGAATC AAAAATGCTA CAAAGAAGTA TATCATTTTC AAATATGGCT TTATCGTCTT GTTTACTTTT 000160 000161 ACCAGGAGAT GCCACTGTCA TAACTTCTTC ATGGGATAAT AATGTGTATG TATCTGTGCA CCCTGCTCTG TGATTCGACG 000240 000241 TGCAGAATAG CTGCCTCTGT GGACATGAGG TGTGAAAAGC CAGAAGCTTT CCCTGCCAGG ACACAGCACT GTTTTCTAAA 000320 000321 GGGAACAGAT ATTAGAGATG AGGACAGTAT GGTTGGATTT GAATATGATT GCTTAGATTG AATAATTTCT CCAATTGGAG 000400 000401 TCTGTTTTTC TCTAAGTTTT AAATTGAGGA GAAAACAGAT GAGCCAGACA TGGAAATTTC TAATTTTAAA TTCAAATTTT 000480 000481 GAATATTTTG ATTTAGTAAT TTGAGAACAA GCAATTTGTA ATTCTAGTGA GCCTTAGTAA GTATAGAATG AAACAACATA 000560 000561 ATGTTTCTTT AATATATGTT TAGGAGCCTT AAAATTAAGC CAGACTACTG TTTTAATGCT TCTCATTATC TTTTAGCTAT 000640 000641 TTTTATTCCA TAGCATTTGG AAGACGCCAG GACACGTTAA TGGGACATGA |
Predicted Small Protein
Name | NONHSAT126791_smProtein_83:232 |
Length | 50 |
Molecular weight | 5377.1533 |
Aromaticity | 0.0816326530612 |
Instability index | 62.6979591837 |
Isoelectric point | 6.50531005859 |
Runs | 7 |
Runs residual | 0.019194704909 |
Runs probability | 0.0489060489062 |
Amino acid sequence | MFSKESKMLQRSISFSNMALSSCLLLPGDATVITSSWDNNVYVSVHPAL |
Secondary structure | LLLHHHHHHHHHHHHHHHHHHHHHLLLLLEEEEEELLLLLEEEEEELLL |
PRMN | - |
PiMo | - |