NONHSAT127850
Revision as of 07:04, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT127850 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
855 nt |
Genomic location |
chr8+:96984267..96986144 |
Exon number |
2 |
Exons |
96984267..96984312,96985336..96986144 |
Genome context |
|
Sequence |
000001 TGGGAGAAGG ACTAAATGGC CTAGAAGAGG GATCACACAT AATGAGGTAC AATTGTCTGC TTATACAGAC TTGCTGGAGC 000080
000081 ATAATAGTTC CACAAAGACC ATTCTCCAAA TAGTGAACCC AGAAGCCTTC ACTTATGACT TCAATAAAAA TTCaccaatg 000160 000161 gaacagaata gatagcccag aaataatgcc acacacctac aaccatctga tcttccacaa aatcaacaaa aacaagcaat 000240 000241 ggggaaagga ctccctattc aatgattggt gctggaataa ctggctagcc atatgcagaa gattgaaact ggaccccttc 000320 000321 cttacaccat atacatgaat caacctaaga tggatcaaag acttaaatgt aaagcctaaa actataaaaa ctctcgagga 000400 000401 taacatagaa aataccattc tggatatagg acctggcaaa tatttcatga tgaagacacc aaaaccaact gcaacaaaaa 000480 000481 caaaaattga caaatgggac tggattaaag aaagaacttc tgcacagcaa aagaaactct caacagtgta aacagacaac 000560 000561 ctgcagaatg ggagaaaatt tttgcaaact atgcatccaa caaaggccct ctaatatcca gaatctatga ggaacttaaa 000640 000641 caaatttaca accgagaaac aaacaacctc attaaaaagt gggcaaagga catgaacaga cacttttcaa aaaaagcata 000720 000721 catccagcca acaagcatat gaaaaaatgc tcatcattag agaaatgcaa atcaaaacca caatgagata tcatctcaca 000800 000801 ccagtcagaa tggctattat taaagagtca aaaaacaaca gatgctggtt aggtc |
Predicted Small Protein
Name | NONHSAT127850_smProtein_134:337 |
Length | 68 |
Molecular weight | 8269.485 |
Aromaticity | 0.149253731343 |
Instability index | 57.1208955224 |
Isoelectric point | 9.39007568359 |
Runs | 7 |
Runs residual | 0.0388372274752 |
Runs probability | 0.0317207964267 |
Amino acid sequence | MTSIKIHQWNRIDSPEIMPHTYNHLIFHKINKNKQWGKDSLFNDWCWNNWLAICRRLKLD PFLTPYT |
Secondary structure | LLEEEELLLLLLLLLLLLLLLLLLEEEEEELLLLLLLLLLLLLLLHHHHHHHHHHHHLLL LLLLLLL |
PRMN | - |
PiMo | - |