NONHSAT128009

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT128009

Source

NONCODE4.0

Same with

,

Classification

sense

Length

471 nt

Genomic location

chr8-:101594573..101608934

Exon number

4

Exons

101594573..101594783,101596339..101596416,101601094..101601207,101608867..101608934

Genome context

Sequence
000001 CTGACAGCCA GACCCAGGAC ATCGTTTTCC AGATGAGCAG GGTGAAGTGC TGGCAGGTCA CTTTCCTTGG AACTCTGCTG 000080
000081 GATACGGATG GGCCCCAGAG AACTCTCAAC CAGAACTTAG AGCTCAGATT TCAATACAGT GAGGATAGTT GCTGGCAGTG 000160
000161 GTTTGTTATT TACACCAAAC AGGCTTTTTT GCTGAGTAGC TGCTTGAAAA AGATGATCTC AGAAAAGATG GTAAAGCTAG 000240
000241 CTGCTGAGAA TACAGAAATG AACTGAACGT ACCTTTTCCA GGGAAAATAA ATTCACTGCC TCTTGGTGAC TGAACAATTC 000320
000321 AAGATGTGCT AGAGAGTAGT AAATCAAAGC AATAAAAGAA TCAAGGAAAC TCTTTTTAAA AGAGTAATAT AATAAAATCC 000400
000401 AACCTCTCAG GCAGGATGGA CCCTCTTAGG CTGAGATTAT TGTATGTATT AAAAAGAAGA AAGAGAAAAG T
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Predicted Small Protein

Name NONHSAT128009_smProtein_32:265
Length 78
Molecular weight 9087.4619
Aromaticity 0.116883116883
Instability index 56.0948051948
Isoelectric point 7.68170166016
Runs 11
Runs residual 0.00677583286279
Runs probability 0.0315797080503
Amino acid sequence MSRVKCWQVTFLGTLLDTDGPQRTLNQNLELRFQYSEDSCWQWFVIYTKQAFLLSSCLKK
MISEKMVKLAAENTEMN
Secondary structure LLLEEEEEEEEEEEEELLLLLLLLHHHLEEEEEEELLLHHHHEEHHHHHHHHHHHHHHHH
HHHHHHHHHHHHHLLLL
PRMN -
PiMo -