NONHSAT128009
Revision as of 07:05, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT128009 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
471 nt |
Genomic location |
chr8-:101594573..101608934 |
Exon number |
4 |
Exons |
101594573..101594783,101596339..101596416,101601094..101601207,101608867..101608934 |
Genome context |
|
Sequence |
000001 CTGACAGCCA GACCCAGGAC ATCGTTTTCC AGATGAGCAG GGTGAAGTGC TGGCAGGTCA CTTTCCTTGG AACTCTGCTG 000080
000081 GATACGGATG GGCCCCAGAG AACTCTCAAC CAGAACTTAG AGCTCAGATT TCAATACAGT GAGGATAGTT GCTGGCAGTG 000160 000161 GTTTGTTATT TACACCAAAC AGGCTTTTTT GCTGAGTAGC TGCTTGAAAA AGATGATCTC AGAAAAGATG GTAAAGCTAG 000240 000241 CTGCTGAGAA TACAGAAATG AACTGAACGT ACCTTTTCCA GGGAAAATAA ATTCACTGCC TCTTGGTGAC TGAACAATTC 000320 000321 AAGATGTGCT AGAGAGTAGT AAATCAAAGC AATAAAAGAA TCAAGGAAAC TCTTTTTAAA AGAGTAATAT AATAAAATCC 000400 000401 AACCTCTCAG GCAGGATGGA CCCTCTTAGG CTGAGATTAT TGTATGTATT AAAAAGAAGA AAGAGAAAAG T |
Predicted Small Protein
Name | NONHSAT128009_smProtein_32:265 |
Length | 78 |
Molecular weight | 9087.4619 |
Aromaticity | 0.116883116883 |
Instability index | 56.0948051948 |
Isoelectric point | 7.68170166016 |
Runs | 11 |
Runs residual | 0.00677583286279 |
Runs probability | 0.0315797080503 |
Amino acid sequence | MSRVKCWQVTFLGTLLDTDGPQRTLNQNLELRFQYSEDSCWQWFVIYTKQAFLLSSCLKK MISEKMVKLAAENTEMN |
Secondary structure | LLLEEEEEEEEEEEEELLLLLLLLHHHLEEEEEEELLLHHHHEEHHHHHHHHHHHHHHHH HHHHHHHHHHHHHLLLL |
PRMN | - |
PiMo | - |