NONHSAT128120
Revision as of 07:05, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT128120 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
473 nt |
Genomic location |
chr8+:103876669..103877536 |
Exon number |
3 |
Exons |
103876669..103876851,103877139..103877222,103877331..103877536 |
Genome context |
|
Sequence |
000001 GAGAGGGAGG CGGCTCGGCT GGAGCGCGCC GTCCGCCCGA CCCCCGCCGC CTCTCGGGCG CCTGCGCTCA CGCTGCGGGG 000080
000081 CCCAGCGCAT TGTGAGCCGG GTCGAGCTCC ACGCTGGCAG CGTCTGAGAG CTGTCCTGGG CCGGAGGTGG CGCGAACCCT 000160 000161 GTGCGGCCTA GAGTGGGCCT GGGGATTGGT GGAGTCAGTC CCAAGCAGGA CCCGCGTTGG AGAGGGGATT ACTGATGTTA 000240 000241 CAAGCGCACA TTACTTCAAT CCCCTAGATG CCTCAGCACT AATGATCATG ATCAGAGACC CCGAGTTCTC TCGTGCTGCT 000320 000321 ACGCTTCGCA ACACATAGCA CAAATGGAAT ATGTGTTGAC ACACCCCTCT GAAGTTAAGA TCTTTGATAT TAAGACCCTG 000400 000401 ACTTTTTTCC CTTTCATTCT TCCGAACCCT CTGTGTACTT TGAGCAGCAC TGTGGTTGAT TAATAAATCA TCA |
Predicted Small Protein
Name | NONHSAT128120_smProtein_281:337 |
Length | 19 |
Molecular weight | 2122.4711 |
Aromaticity | 0.0555555555556 |
Instability index | 42.6388888889 |
Isoelectric point | 9.26153564453 |
Runs | 5 |
Runs residual | 0.0116959064327 |
Runs probability | 0.0341812400637 |
Amino acid sequence | MIMIRDPEFSRAATLRNT |
Secondary structure | LEEELLLLLLHHHHHLLL |
PRMN | - |
PiMo | - |