NONHSAT128319

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT128319

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1260 nt

Genomic location

chr8+:112000263..112002710

Exon number

2

Exons

112000263..112000924,112002113..112002710

Genome context

Sequence
000001 CTTCGTCACA CTACTTTCAT TTTAGTAAAA AACAGAGACT CAAATCCATC AAAACACCGG CCAATGTCAT ATCCTGTATG 000080
000081 GAAAATGAGG AACATGAAAT CTGTTCTTAA AACCACCAAT TCAGGATTAT GTTCATTACT ACATGGCCTC CTAAGTTTAC 000160
000161 TGACAAACCT AATATTATAT GTCTAACTAG GTCTGCCATA GAGATGGCTA AGaattttat ttattttttt aaataaCTCA 000240
000241 AAATTAAAAC AAGATCAAAA GTTACTTAGA TTCATCCTGT CCATTCTTTT CCATCAATTC AGTGGACTCA CTTGATTTCC 000320
000321 ATGTTGGATT TCCATCTCTT CCTTGTGCAT TTTAGTTATT TTTTTGAGTA TGCGAAATAT TAACCATTTA TGAAAACATT 000400
000401 CTTTATAACA ACGTATACAC ACACATTCAC TTTTGACCAT AAAAAATATT GTAAGGAggc cggatgcagg ggttcacgcc 000480
000481 tgtaatccta acactttggc aggctgagat ggatggatca cgaggtaagg agttcgagac cagcctgacc aacatagtga 000560
000561 aatcccatct ctactaaaat aaataaataa aaacaaaatt agctgtgtct ggcagtgtgt gcctgtaatc ccagctactc 000640
000641 aggaggctga ggcaggagaa tcttttaaaa aaagtatgca ttacattgct catgtacatt agtgtagatt catgaattct 000720
000721 gattttattt tttgtgtaat actctagtat ggaccattat cttttgtggc tcatattgtc tcatgtttgg ttggacatta 000800
000801 tgaacctctt aaattgattt tctatctatt acacaacttc atcatgcttt gaatactttc atacgttttg ggaccattct 000880
000881 tatattggtt ctagttccat tttgaacatt tgtatgctac tcctgcaatt atccatttct ccaatgagtc tggtttctaa 000960
000961 ttctggagat ggaaattcac aaaataatat ccaggtctta gatatactca ttgagttgtc actacttatc ggtcttctca 001040
001041 gggaatagag ataaatgcat cacacatgca tacacacaca catacacata cacatacaca cacatctctc tctctctctc 001120
001121 tcccccacct cccctccctc cacctgagtt cacactgaca cctggtccac aaggtttatt ttagccttca tttttaaatt 001200
001201 tttatctgct ttatctgaca gtgaaaaatc tacctcttat tatccacatt ttgtttgttt
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Predicted Small Protein

Name NONHSAT128319_smProtein_128:235
Length 36
Molecular weight 4214.0237
Aromaticity 0.2
Instability index 44.4457142857
Isoelectric point 9.51531982422
Runs 7
Runs residual 0.0188861985472
Runs probability 0.0143967496909
Amino acid sequence MFITTWPPKFTDKPNIICLTRSAIEMAKNFIYFFK
Secondary structure LEELLLLLLLLLLLLLEEELHHHHHHHHHHHHHHL
PRMN -
PiMo -