NONHSAT129222
Revision as of 07:08, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT129222 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
507 nt |
Genomic location |
chr8-:134254117..134256903 |
Exon number |
2 |
Exons |
134254117..134254317,134256598..134256903 |
Genome context |
|
Sequence |
000001 cttggggaat ggagtgaaat tatctgtagg gcctagcata gtgcctggca cgtagcaagc tgcaagtgat ggttgcCACG 000080
000081 GAGACACCAG CAGCCTTGCC TGGTGGGGCT GGATTGTTCC CTACCCACGG TCCACCCTGT TCCTCCTTTG TAAggcagga 000160 000161 caaggcaggg cagggcagCG GGCGGATGGG CATCCTTTCG GAAAAAATTC ATAGAGCGCA GAGGGCCTTG GCTGTGGTGT 000240 000241 TTGGCACTAA CGAGCTTCCC TCTCTCCTAG ATGGCGGACT GTGGCGGCCT CCCGCAGATC TCCCAGCCGG CCAAGCTCGC 000320 000321 TGAGGCCTTC AAGTACTTCG TGCAGGGCAT GGGATACAGT GAGTATGGCA TTCCCCGTGT GCAGTGGGTC GGGGCATGTG 000400 000401 TCGGAATTGG AAGTGCTCTG TCCTGAGCCA GGTTTGGATG AGCAATTCTG TGTCCCCCTG GCCAGCTTCA GCTTTCTGGG 000480 000481 AGGAAACAGT TAGGTGTGTG GAGGGCA |
Predicted Small Protein
Name | NONHSAT129222_smProtein_68:322 |
Length | 85 |
Molecular weight | 8659.8115 |
Aromaticity | 0.047619047619 |
Instability index | 46.1 |
Isoelectric point | 9.29595947266 |
Runs | 9 |
Runs residual | 0.0268425841674 |
Runs probability | 0.0267326149679 |
Amino acid sequence | MVATETPAALPGGAGLFPTHGPPCSSFVRQDKAGQGSGRMGILSEKIHRAQRALAVVFGT NELPSLLDGGLWRPPADLPAGQAR |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLLEEEELLLLLLLLEELLHHHHHHHHHHHHHHHHLL LLLHHHHLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |