NONHSAT129730
Revision as of 07:10, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT129730 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
842 nt |
Genomic location |
chr8-:145580070..145581840 |
Exon number |
7 |
Exons |
145580070..145580191,145580261..145580373,145580469..145580575,145580651..145580781,145581100..145581162,145581289..145581446,145581693..145581840 |
Genome context |
|
Sequence |
000001 GCGGCCGCGC CCGCACCCGC ACCGGCACCC ACGCCCACGC CCGAGGAAGG GCCCGACGCG GGCTGGGGAG ACCGCATTCC 000080
000081 CTTGGAAATC CTGGTGCAGA TTTTCGGGTT GTTGGTGGCG GCGGACGGCC CCATGCCCTT CCTGGGCAGG CTGCGCGCGT 000160 000161 GTGCCGCCGC TGGCAGGAGG CCGCTTCCCA ACCCGCGCTC TGGCACACCG TGACCCTGTC GTCCCCGCTG GTCGGCCGGC 000240 000241 CTGCCAAGGG CGGGGTCAAG GCGGAGAAGA AGCTCCTTGC TTCCCTGGAG TGGCTTATGC CCAATCGTTT TCACAGCTCC 000320 000321 AGAGGCTGAC CCTCATCCAC TGGAAGTCTC AGGTACACCC CGTGTTGAAC TGGTAGGTGA GTGCTGTCCT CGGCTCACTT 000400 000401 TCCTCAAGCT CTCCGGCTGC CACGGTGTGA CTGCTGACGC TCTGGTCATG CTAGCCAAAG CCTGCTGCCA GCTCCATAGC 000480 000481 CTGGACCTAC AGCACTCCAT GTGGAGTCCA CAGCTGTGGT GAGCTTCTTG GAGGAGGCAG GGTCCCGAAT GCGCAAGTTG 000560 000561 TGGCTGACCT ACAGCTCCCA GACGACAGCC ATCCTGGGCG CACTGCTGGC AGCTGCTGCC CCCAGCTCCA GGTCCTGGAG 000640 000641 GTGAGCACCG GCATCAACCG TAATAGCATT CCCCTTCAGC TGCCTGTCGA GGCTCTGCAG AAAGGCTGCC CTCAGCTCCA 000720 000721 GTGCTGCGGC TGTTGAACCT GATGTGGCTG CCCAAGCCTC CGGGACGAGG GGTGGCTCCC GGACCAGGCT TCCCTAGCCT 000800 000801 AGAGGAGCTC TGCCTGGCGA GCTCAACCTG CAACTTTGTG AG |
Predicted Small Protein
Name | NONHSAT129730_smProtein_548:643 |
Length | 32 |
Molecular weight | 3407.9406 |
Aromaticity | 0.0967741935484 |
Instability index | 71.0516129032 |
Isoelectric point | 11.7229614258 |
Runs | 7 |
Runs residual | 0.0245295698925 |
Runs probability | 0.0130466601055 |
Amino acid sequence | MRKLWLTYSSQTTAILGALLAAAAPSSRSWR |
Secondary structure | LLEELEEELHHHHHHHHHHHHHHLLLLLLLL |
PRMN | - |
PiMo | - |