NONHSAT130434
Revision as of 07:14, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT130434 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
944 nt |
Genomic location |
chr9+:22113677..22121096 |
Exon number |
3 |
Exons |
22113677..22113798,22120199..22120409,22120503..22121096 |
Genome context |
|
Sequence |
000001 GACGTAAGAT CAAATGCAAT AGCATGTCAA ACAATGTGTA ACTCCAGTTA TACAAACATT ACTGTATCTC ATTGGGGATA 000080
000081 CGAAGCTCTA CACACTTGAA GATGGTGAAG GAATATAAAA ATTATCTTAC AGACAGCAAG TTGAACATTG TGGGATGCAT 000160 000161 GAGCTATTGA GGCCTTTGCA GCTTTCTGCT ACATGGAGGC TAGGGCCAGA GTCAAGATTT ATGCTTTGCA GCACACTGGT 000240 000241 CAGCTGTTTT TGCAAATCAG ATTAAATGAT TTTTAAATGA GGCTGAGAGC ATGGAAGATA CTAATGTGTG TTTCCTTGTG 000320 000321 AGCTACTGCA TAAGTTAGGA AATTGAAATA CAGAAAGATG AAAAGTGATT TGCCCAAGCA TATAGATCAA AGCTGTGGCA 000400 000401 GAACCAGGAC TGGAACCTAT ATCTCTCTAC TAATGGTTTT TTTAAAAAAA TAACCTTGTT TCAAAAATAT TAAAAAGTCA 000480 000481 CAAGAAAGGT AAACATGTGG ATAAACAAAA TGAAGAAAAT AAAAATTATC CAGTAATAAC ATATTGGCAT ATGTCTTTCT 000560 000561 GGTATATTTT CCTGTGTTGT CATCATTATC ATCTCCATCA TCATTATATC CATCATTATC ATCATCATCA TCATCATCAT 000640 000641 CATTATCATC ACCATAGTGA ACATGTAATG CTTACCTAGT GCCAGATGCT GTCTAGGCAT TTTACATGTG TTACTGGTAA 000720 000721 CTCATGTAAT CCTCATAACA ACCTTATAAG GTGGTTGCTA TTATCCCCAT GTTACATATG AAGAGACAGA AGCATAAAGA 000800 000801 AGTTGCACCG CTGGTAATTG GCTGGGATTT GAACTTAAGC AGTCTAACCT TAGAGTAATG ATTTTAACAA CTATGCTATA 000880 000881 TACATACAAA TTTACAAAAT AAAACTGGGC TCAGACAATA AAAAAAAAAA AAAAAAAAAA AAAA |
Predicted Small Protein
Name | NONHSAT130434_smProtein_101:169 |
Length | 23 |
Molecular weight | 2600.0379 |
Aromaticity | 0.136363636364 |
Instability index | 60.1772727273 |
Isoelectric point | 7.88275146484 |
Runs | 5 |
Runs residual | 0.00909090909091 |
Runs probability | 0.0349231584526 |
Amino acid sequence | MVKEYKNYLTDSKLNIVGCMSY |
Secondary structure | LHHHHHHHHLLLLLLEEEEEEL |
PRMN | - |
PiMo | - |