NONHSAT130793

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT130793

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1446 nt

Genomic location

chr9+:33730334..33742281

Exon number

6

Exons

33730334..33730477,33731116..33731717,33731761..33731892,33732973..33733357,33738286..33738414,33742228..33742281

Genome context

Sequence
000001 AGGTGAGAAA GGACAGGCCT AGACAATGAA GCAAGGGGCG AGTGGGTGGA TGGGTAAAAC CACCTGCTCC TCAAAACAGC 000080
000081 CAGGCTCTGA GATGAAGCAG GAATCTGCAC TTAAACCGAG GCTGGATCCA TCCTAGGGAT TCAAGGGGTT TTAACTCATG 000160
000161 GTATGCTGTT TCTGCAGGCC TGTGTTGTCA AGCGAAAACA GAAAAGAGAA GGGAATTCCA CCTTTGCCCA CTGAGAACAC 000240
000241 ATCTATGCTG AGAACACATC TACCCAACTC CTCTGTCACA ACCCCTGTGA GAAGGTTCTG CCATCTCCCA GCCCTGAAGA 000320
000321 TTGTGAGGTC ATCTGACCAC TTATTACATT GCTAAACATG GCAGGATGTC ACCTGACTCG ACACTAAGCT GCCCATCAAT 000400
000401 CATCACATCC CCTTTCTCCC ACTTACTTTT CTATCACCCC GTAGATTCCC AACAGCTGTC CTTAAGTCCT CCAGGCTACA 000480
000481 GAAACCACTC TTGAAACAAT ATGTCAGCAT ACCATTAGTG CCCTTTAACT CATACCCTCA CTTCCCAGCC CCTCCTCTGT 000560
000561 GAACGAAGTC TCTCCTTACC TCTTCCTCCA GCACTAATCA ATCTAATGTT CCTTCACTCT TTTCTCCCCT CCCAGCTTCC 000640
000641 CTCCAACCTG CACCCAATCC CCCCAAATCC TTTCTCCTCT TTCTTTGCAA TTCTCCACAC CAAGACTGAA CACTTGTCAG 000720
000721 AAATGGTGCT CCCCCTGGGC CCCTCCGCTC CCTGATGGCC CTGGGCCTCC CTCCCGACAG CTGAGGCCCT TCCTGGATCT 000800
000801 CTACACGTCA CCAAGCTAAG CCAGTGTTCC AAAATAGTCT CCTGAACAAT GATGACAACT GCACAGTTAT TTTGGAAGTT 000880
000881 CAGGGAAGCA CCAGATTTAT TTTAAATGAT GGGAAGAGGT GTCAAATAAA GGTTATAAAA ACATTCCAGT AAATAAGGCC 000960
000961 AATGGTGGGT TGATAATATC TTCAAAGAAC ATGTTTAGGA TCATACGGTT CTTCTTCATT CTTCTCTGCA GAACTTCCTG 001040
001041 GCAGTGATGG CAGTGGAACA TTGGAAACAG AGATGAACAG GAGGTGGGAA GAGGAGGCTA AGTACATGTA GGCCTAAAAG 001120
001121 TCTCTGCCTT GGGAGATTTT TAACAGTCCT GGATGGAGGT AAGGAGGCAG GCGTGATTCT AAGATCTCAA GGAAAGGAGA 001200
001201 TTCTATGTCA CTCTTCTCTT CCCTTGGCCC TCAGACTGTT TACGAACAAA ATAATTTCAT CAACTTGCTG CATCCACAAG 001280
001281 AGGGAGCCTC GTGCCAGCTT CTCCAGCCAG GATGGTAGCC CCCAAGACTC TTCCTCTTCC ATCCACCTTT AGGTGcagca 001360
001361 tccaacaagg tcaaaatcac aatgtcttgc atggagaaac aagatcttat attggacact gattcatagc atatacagcc 001440
001441 ttctga
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Predicted Small Protein

Name NONHSAT130793_smProtein_605:754
Length 50
Molecular weight 5423.268
Aromaticity 0.102040816327
Instability index 59.9836734694
Isoelectric point 6.36700439453
Runs 8
Runs residual 0.00121345835632
Runs probability 0.0301514750044
Amino acid sequence MFLHSFLPSQLPSNLHPIPPNPFSSFFAILHTKTEHLSEMVLPLGPSAP
Secondary structure LEELLLLLLLLLLLLLLLLLLLLLHHHEEELLLLLLHHHHLLLLLLLLL
PRMN -
PiMo -