NONHSAT131016
Revision as of 07:16, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT131016 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
460 nt |
Genomic location |
chr9+:36630004..36633197 |
Exon number |
2 |
Exons |
36630004..36630364,36633099..36633197 |
Genome context |
|
Sequence |
000001 actaattttt gtatttttag tagagacagt gtttcaccac gttggccagg ctggtcttga actcctgatc tcaggtgatc 000080
000081 tgcccgcttt gacctcccaa agtgctggga cttcaggtgt gagccaccac gcccagccAA GAAATTGATT TTTTTTAGTT 000160 000161 AATAATGTTT ACCAAGTATT GTAGTTGGGT GAAGTCTTCA AGCTTAAAAG TAAACCTCCA GCATGTTATT ACCTAAGGAA 000240 000241 TTTGTGTCAA GGCTGATTGA ACCTGAATCT CTTAAATGCT TTGTTTTTGT AGAGAGGAAA ATATGATGTT CCCAAGTGGC 000320 000321 TCTCTCCCAG TAGCATTCTG CTTCTTCAAC AAATGCTGCA GGTGGACCCA AAGAAACGGA TTTCTATGAA AAATCTATTG 000400 000401 AACCATCCCT GGATCATGCA AGATTACAAC TATCCTGTTG AGTGGCAAAG CAAGAATCCT |
Predicted Small Protein
Name | NONHSAT131016_smProtein_275:388 |
Length | 38 |
Molecular weight | 4415.2381 |
Aromaticity | 0.189189189189 |
Instability index | 53.6378378378 |
Isoelectric point | 8.40472412109 |
Runs | 7 |
Runs residual | 0.009422266303 |
Runs probability | 0.0424331894921 |
Amino acid sequence | MLCFCREENMMFPSGSLPVAFCFFNKCCRWTQRNGFL |
Secondary structure | LEEEELLLLLLLLLLLLLHHHHHHLLLLHHHHHLLLL |
PRMN | - |
PiMo | - |