NONHSAT131196
Revision as of 07:16, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT131196 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
793 nt |
Genomic location |
chr9+:38838558..38841913 |
Exon number |
2 |
Exons |
38838558..38838672,38841236..38841913 |
Genome context |
|
Sequence |
000001 AGTCTGGTGC CGCTGGGCCC ACACACCTGG GAGCACTCCC TGGCTGCCCA CACCCTGTTC CTTTCAAGAA TTTGGGTTGT 000080
000081 GTTTTCTTCT TTCTTGACAA TTAGTATAAG GGCAGAAGGG ACAGGCATTT CATGAGCATT TCAAGCCCCT GCTTGGGTGA 000160 000161 AGTCTGTTAA TGCTCATTGG CCAACATCAA TGGGGAGAGA AGTATGCTTC TGTCATGGAG GTTAAAGAGA ATAGAGTGAA 000240 000241 TCTTTGATAG ACCATAATCC AATCTCCCAC AGCAAGGAGA GTATACAAAC CACATCTTAA GTCTGGATCG GCCTGGGATT 000320 000321 TTTCTGCCCC TTGACAGCAG CAGCTGCCTT GCCCTTTGCC CAAGGGAGTC CACTCTGCTG CTTCCTGAGT GTCCTCATTC 000400 000401 CTGGTCACTG CACGATTGTC CTTAAATGGT GTTAGCTATT TGGACATGGG CTAAATGCTA CTCCCCATGC ATGTTTGCTC 000480 000481 ACCTGTTCCA TTTCTGTGTC TAGGCAGGTT GGCTGAGCCT GTGGCTTCTC TCTAGAGCTT CCACTGCATC TTACTGAATT 000560 000561 TCTTAGGAAG TAGTTGACAC AATTGACTAC ACTGATTTCT GCAAGGTCCC CTAAATCATT TCAGAATGCA TGGGGATTGA 000640 000641 CTCCCAAGAG ACAAAAGGGA AGAACTTAAT GCACAGTGCA CTAAGCAGCA AAGTAGTTTT GCCTCCTTGA GCCTATTCAA 000720 000721 GGTTCTCTGT CACACCTTGA ATCAGCCAAG ATCAAATTTT AGTGTTCGTC ACTTGTAAAT GTAGTAGACA CAA |
Predicted Small Protein
Name | NONHSAT131196_smProtein_629:709 |
Length | 27 |
Molecular weight | 2768.2131 |
Aromaticity | 0.0 |
Instability index | 63.0307692308 |
Isoelectric point | 8.27593994141 |
Runs | 5 |
Runs residual | 0.0169946332737 |
Runs probability | 0.036742624978 |
Amino acid sequence | MGIDSQETKGKNLMHSALSSKVVLPP |
Secondary structure | LLLLLLLLLLLLHHHHHLLLLEEELL |
PRMN | - |
PiMo | - |