NONHSAT131196

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT131196

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

793 nt

Genomic location

chr9+:38838558..38841913

Exon number

2

Exons

38838558..38838672,38841236..38841913

Genome context

Sequence
000001 AGTCTGGTGC CGCTGGGCCC ACACACCTGG GAGCACTCCC TGGCTGCCCA CACCCTGTTC CTTTCAAGAA TTTGGGTTGT 000080
000081 GTTTTCTTCT TTCTTGACAA TTAGTATAAG GGCAGAAGGG ACAGGCATTT CATGAGCATT TCAAGCCCCT GCTTGGGTGA 000160
000161 AGTCTGTTAA TGCTCATTGG CCAACATCAA TGGGGAGAGA AGTATGCTTC TGTCATGGAG GTTAAAGAGA ATAGAGTGAA 000240
000241 TCTTTGATAG ACCATAATCC AATCTCCCAC AGCAAGGAGA GTATACAAAC CACATCTTAA GTCTGGATCG GCCTGGGATT 000320
000321 TTTCTGCCCC TTGACAGCAG CAGCTGCCTT GCCCTTTGCC CAAGGGAGTC CACTCTGCTG CTTCCTGAGT GTCCTCATTC 000400
000401 CTGGTCACTG CACGATTGTC CTTAAATGGT GTTAGCTATT TGGACATGGG CTAAATGCTA CTCCCCATGC ATGTTTGCTC 000480
000481 ACCTGTTCCA TTTCTGTGTC TAGGCAGGTT GGCTGAGCCT GTGGCTTCTC TCTAGAGCTT CCACTGCATC TTACTGAATT 000560
000561 TCTTAGGAAG TAGTTGACAC AATTGACTAC ACTGATTTCT GCAAGGTCCC CTAAATCATT TCAGAATGCA TGGGGATTGA 000640
000641 CTCCCAAGAG ACAAAAGGGA AGAACTTAAT GCACAGTGCA CTAAGCAGCA AAGTAGTTTT GCCTCCTTGA GCCTATTCAA 000720
000721 GGTTCTCTGT CACACCTTGA ATCAGCCAAG ATCAAATTTT AGTGTTCGTC ACTTGTAAAT GTAGTAGACA CAA
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Predicted Small Protein

Name NONHSAT131196_smProtein_629:709
Length 27
Molecular weight 2768.2131
Aromaticity 0.0
Instability index 63.0307692308
Isoelectric point 8.27593994141
Runs 5
Runs residual 0.0169946332737
Runs probability 0.036742624978
Amino acid sequence MGIDSQETKGKNLMHSALSSKVVLPP
Secondary structure LLLLLLLLLLLLHHHHHLLLLEEELL
PRMN -
PiMo -