NONHSAT131243
Revision as of 07:17, 17 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT131243 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
527 nt |
Genomic location |
chr9-:41214067..41217717 |
Exon number |
4 |
Exons |
41214067..41214261,41214976..41215169,41215959..41216019,41217641..41217717 |
Genome context |
|
Sequence |
000001 TTTGATCAGA AGCCCATGAG TCCAATCAAA GGTATTATTT ATTTGAAATT TAAAAACCAT GCAAGCggcc gggcgcgAGA 000080
000081 GATAGGATTT TACTCCACAG AGAACAAAGT GGAGCTCATA TCAACCTGGG ATTAATAATT TGTTTTTCCT CTCTTTTTGG 000160 000161 TAACATTCTA TCACCCTCGC CTGCAACCAA AATGACCCTC ACCCTGGCAG CCAGCACTGG GATTCCATCC TCATCGAGCT 000240 000241 CCTTGACACG CAGGTCGGCT TCACTGTGGG CAAGCACAAT CATCATTTGC AGACAAAAGG AGAACCCAGT TATTTGATCT 000320 000321 TGATTATAAG ATTCAAAGAC CTTGTGACTT TTCTGAGCCC TGAGGATGAG GATGAGGTTT CCATCACTTT TCAACTTTGA 000400 000401 ATATAGAACA GAGCAGGATA TTTGCTGTCC AGTGAACATC AACATATTTC AGCAAGCCTC ATCTTTGTTC TCATTGATGG 000480 000481 AAAGCTTAAA TTAAATCTTT CTCAGCCAGA ACATTCAACA AGGGATA |
Predicted Small Protein
Name | NONHSAT131243_smProtein_365:493 |
Length | 43 |
Molecular weight | 5021.7487 |
Aromaticity | 0.142857142857 |
Instability index | 65.3476190476 |
Isoelectric point | 4.86773681641 |
Runs | 7 |
Runs residual | 0.00949367088608 |
Runs probability | 0.0457263986677 |
Amino acid sequence | MRMRFPSLFNFEYRTEQDICCPVNINIFQQASSLFSLMESLN |
Secondary structure | LLLLLLLLLLLEELLLLLEELLLLLLHHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |