NONHSAT132831

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT132831

Source

NONCODE4.0

Same with

,

Classification

sense

Length

625 nt

Genomic location

chr9-:88938543..88939568

Exon number

2

Exons

88938543..88938875,88939277..88939568

Genome context

Sequence
000001 AAATGGAATT CTCTTATTTT TGCTTGATTT TTTTTTCAAG CTTTATGTTG CATAAGAGGG TTTTTTGCAT TTTGCATAAA 000080
000081 TTCTGTGTGC AGTCATGGGG ATCTCACATT TTTAAACCCT CCCCTGCAGT TTCTGTGGCT CAGCTCTTCT GGCCAATTGC 000160
000161 CTAACCTGCT GGAGTTCTAG GGGAGGAGAA AAGATTGAGA GAAGTGGTGT CTCCTCCTGG TGCCTCCCTC TCGCCCCTGA 000240
000241 AATTCAGTCC AGCCAATTCA GTGATGGGGC TTCCCAGGGC AGAAGAGTGG AGATCCCTAC TCTGTTAAAA GAAATGTGGC 000320
000321 AAGAACCCTA AATAGTCAAC CTGTGTTTGA ATATATACTT CATTGTTTAA GGACAACATA CAAGTATTTT GCTCTTCCAC 000400
000401 ACAAAATTAC AAAATCCAGC CTTCTAAAGC CTCTGAATGC AATTACATGT ATTTCAGAAC ATTCTAAAGA AGTAATAAAT 000480
000481 CATCATCCAG ATGTACAAAC AAAAGATGAT AAGCTCAAAA ACTCAGTTTT GGCCCAAGGT CCTGGTGCTA CCAGTTCAGC 000560
000561 TGCAAATACC TGTAAGGTAC AGCCACTTAC TCTTAAAGAG ACTGCTGAAA GTTTTGGAAG CCCAC
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Predicted Small Protein

Name NONHSAT132831_smProtein_2:163
Length 54
Molecular weight 6260.4426
Aromaticity 0.22641509434
Instability index 60.3018867925
Isoelectric point 9.05792236328
Runs 8
Runs residual 0.00931891394386
Runs probability 0.0430908850027
Amino acid sequence MEFSYFCLIFFSSFMLHKRVFCILHKFCVQSWGSHIFKPSPAVSVAQLFWPIA
Secondary structure LLEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHLLLEELLLLLLLHHHHHHLLL
PRMN LLLLLHHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHHHHHHLL
PiMo oooooTTTTTTTTTTTTTTTTTTTiiiiTTTTTTTTTTTTTTTTTTTTTTToo