NONHSAT132833
Revision as of 07:21, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT132833 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
680 nt |
Genomic location |
chr9+:89028900..89029579 |
Exon number |
1 |
Exons |
89028900..89029579 |
Genome context |
|
Sequence |
000001 aaatgcttgt catgtatgtt ccaggctttg ctctagtaat ttcggatata tcaatgaaca aagcaggaaa gaaaaaaaaa 000080
000081 aaaggcaaaa tctctgcctt ccgggagctc acattcccac aggagtcaca ggaaacagcc aatgaccaGT AAGCATCACA 000160 000161 AAGAAGTCAT GCCAAAGAAC CAGACAAATA GCTGGAAGGA AGAGGGGAAC TCCTTTGTGA CGCCAAATGG GCCAAAGGGT 000240 000241 CGCTGGGAAA ACTAAGCCTT ACTGTCCATC TTGCCTTCAG GATAATGTGA AATATGGCCT AATTTTTGAA GTTTTTTTCT 000320 000321 TAGAAATTTT ACTGAATCCA AAATAAAACA AGAAGATCAT GGTGGATATA GCTTCCAAAT TTATTCTGCA ATAAAACAGG 000400 000401 TTTGAATCTA GATATACAAG CAAATAGCAA ATAATATACA TTCTTTTTTG CAGAGTCCAG AATTCTCTTT TCTCAACACT 000480 000481 AGATGGCAGT AGAGTTAAAG AAAAAAATCC CAGCAGTTCT TTGTACAGGG ATTTGGTGAT TTTTCCCATA AAGCTGCGAT 000560 000561 GAGGATGAAC TCAGAGCAAA ATCTATGTAA GTAGAAAGTT AAATTACAAT AGAGGTGTGA AATGATGCTT TAACATGTCA 000640 000641 CACGCTCATT TTGGCAAAAT GTGTTTGGGG CAGAActctc |
Predicted Small Protein
Name | NONHSAT132833_smProtein_2:151 |
Length | 50 |
Molecular weight | 5476.3508 |
Aromaticity | 0.0816326530612 |
Instability index | 42.5632653061 |
Isoelectric point | 9.52276611328 |
Runs | 10 |
Runs residual | 0.0420297848869 |
Runs probability | 0.0426249779191 |
Amino acid sequence | MLVMYVPGFALVISDISMNKAGKKKKKGKISAFRELTFPQESQETANDQ |
Secondary structure | LEEEEELLEEEEEEELLLLLLLLLLLLLLEEHHHLLLLLLHHHHHHLLL |
PRMN | - |
PiMo | - |