VLDLR-AS1
Revision as of 05:34, 23 June 2016 by Chunlei Yu (talk | contribs) (Created page with "==Annotated Information== ===Approved Symbol=== VLDLR-AS1 ===Approved Name=== VLDLR antisense RNA 1 ===Previous Symbols=== _ ===Synonyms=== _ ===Chromosome=== 9p24.2 ===RefSeq...")
Contents
Annotated Information
Approved Symbol
VLDLR-AS1
Approved Name
VLDLR antisense RNA 1
Previous Symbols
_
Synonyms
_
Chromosome
9p24.2
RefSeq ID
NR_015375
OMIM ID
_
Ensembl ID
ENSG00000236404
pubmed IDs
26910538
Sequence
>gi|751130527|ref|NR_015375.2| Homo sapiens VLDLR antisense RNA 1 (VLDLR-AS1), long non-coding RNA
000001 GCCTCCTAGG AGGCGGGTGG GCAAACGGAG ACCTACGCCT CGGGGTCTCC CGGTGCCCCG GCTGGGTCCC GCCCGCCGGC 000080
000081 GGAGGGGCGC GTCCTCACTC ACCGGTTCCG GTGGCGCCGC TCTCCCGGGG CGCCCAGCAC AGCGCGAGCA GCAGCCAGAG 000160
000161 CGCCCAGAGC GCGGACGTGC CCATGGTGCC CGCCTGGATG GTGCCGCCGC CGCCGCCGCC GCCGCCGTTC GCTCCGCACG 000240
000241 ACAAGTTACC AGTCCTTCCG AAAGGAGGAA GAAGGCTCCA AGCTTGATAT AGAAGACTAT CATATGAACC AGAAAGGGTA 000320
000321 ACTGAAACCA AAGAAATGAC TCCAGTATCA AGCTAAAGAC ATGCCTTAAA GGATGAGGAG GAGCAGAAAT CTTACCAGCA 000400
000401 AGGCAAGAAA GAAGCCGTAC GTGAACAGCC TCTGCTTTAG GCCCAGAAGG AAAAGAAGCT TACAGGAGAC AATCAGTCTT 000480
000481 ACACTCTTCC ATGGTCACAA ACAAGAGGTC CCTGGATCTA CAGGTCATCT TGCCCCTGAA ATGGCCCTGG AAAGCTATGG 000560
000561 CTGAAGAATG GAGGAAAAGA TGACTTTCTC TGTTTCTTCA GACCAGGCAT CAACTGGGAT GTTGGGATGT TGATAAAAGG 000640
000641 ACATCTCATC CTTTGTTTTC TGCCTATGCT TTCACCATAC CCATTCCCAT GTCTGGTCAT CACAGCATCC TTCACAGCCC 000720
000721 TTAGCTGAAT CATGTTGAGT ACAGGATGGT GTGAATATCA TGGTTTGAAT GCAACCATGG TCTGTCAGTG TGGCTTGTTT 000800
000801 TTTGCAGCCC ACTTAGACTT AAGCCCTCTT AATTTCAAAA TTACGTTCAT ATGTGCCAAT AAAGTTGTCC CTACATGAAC 000880
000881 TGAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAA
000081 GGAGGGGCGC GTCCTCACTC ACCGGTTCCG GTGGCGCCGC TCTCCCGGGG CGCCCAGCAC AGCGCGAGCA GCAGCCAGAG 000160
000161 CGCCCAGAGC GCGGACGTGC CCATGGTGCC CGCCTGGATG GTGCCGCCGC CGCCGCCGCC GCCGCCGTTC GCTCCGCACG 000240
000241 ACAAGTTACC AGTCCTTCCG AAAGGAGGAA GAAGGCTCCA AGCTTGATAT AGAAGACTAT CATATGAACC AGAAAGGGTA 000320
000321 ACTGAAACCA AAGAAATGAC TCCAGTATCA AGCTAAAGAC ATGCCTTAAA GGATGAGGAG GAGCAGAAAT CTTACCAGCA 000400
000401 AGGCAAGAAA GAAGCCGTAC GTGAACAGCC TCTGCTTTAG GCCCAGAAGG AAAAGAAGCT TACAGGAGAC AATCAGTCTT 000480
000481 ACACTCTTCC ATGGTCACAA ACAAGAGGTC CCTGGATCTA CAGGTCATCT TGCCCCTGAA ATGGCCCTGG AAAGCTATGG 000560
000561 CTGAAGAATG GAGGAAAAGA TGACTTTCTC TGTTTCTTCA GACCAGGCAT CAACTGGGAT GTTGGGATGT TGATAAAAGG 000640
000641 ACATCTCATC CTTTGTTTTC TGCCTATGCT TTCACCATAC CCATTCCCAT GTCTGGTCAT CACAGCATCC TTCACAGCCC 000720
000721 TTAGCTGAAT CATGTTGAGT ACAGGATGGT GTGAATATCA TGGTTTGAAT GCAACCATGG TCTGTCAGTG TGGCTTGTTT 000800
000801 TTTGCAGCCC ACTTAGACTT AAGCCCTCTT AATTTCAAAA TTACGTTCAT ATGTGCCAAT AAAGTTGTCC CTACATGAAC 000880
000881 TGAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAA
Predicted Small Protein
| Name | VLDLR-AS1_smProtein_731:877 |
| Length | 48 |
| Molecular weight | 5307.2387 |
| Aromaticity | 0.125 |
| Instability index | 16.9645833333 |
| Isoelectric point | 6.67791748047 |
| Runs | 8 |
| Runs residual | 0.00109649122807 |
| Runs probability | 0.0677552552553 |
| Amino acid sequence | MLSTGWCEYHGLNATMVCQCGLFFAAHLDLSPLNFKITFICANKVVPT |
| Secondary structure | LLLLLLEELLLLLEEEEHHHHHHHHHHLLLLLLLLEEEEEEELLLLLL |
| PRMN | LLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLLLLLLLLL |
| PiMo | oooooooooooooooooooTTTTTTTTTTTTTTTTTTTTiiiiiiiii |
