TTC28-AS1

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Annotated Information

Approved Symbol

TTC28-AS1

Approved Name

TTC28 antisense RNA 1

Previous Symbols

TTC28AS, TTC28-AS

Synonyms

KIAA1648

Chromosome

22q12.1

RefSeq ID

NR_026962

OMIM ID

_

Ensembl ID

ENSG00000235954

pubmed IDs

11258795

Sequence

>gi|224028239|ref|NR_026962.1| Homo sapiens TTC28 antisense RNA 1 (TTC28-AS1), transcript variant 2, long non-coding RNA

000001 GTGCCCCACC CCGGGCACAC GAGGCCTCCA CTGCGGTTGC GCAGCCTGCC GAAGAGCGTG CGGCTTCTAC TGCGGCTGCG 000080
000081 CAAGCTCGAC GCGCGCACTC TTGTCTGCTT ACGAGGGCTC CTCCCTTCAG CTTTGGTCCC TCGGGGCGTC TGGGCAGCCT 000160
000161 ACGCTTTCCG GATAAAAATG GCAGAATGAA AGAATTATGA GTGGAACTAG AGAATAGGAA AGACATGAAC CAACGCCCAA 000240
000241 AATGAGAAAG AAGGACATAT AAAGAAAAAG ACAAATACAA GTGAAAAAAA TAGACTAATG GATTAACGTC CCTGTCGTGT 000320
000321 GACATTTTCT GACTATGGAA ATGATATTAG ACAAAAAGCA ACTTCAAGTG GTTTTCTTAT TTGAGTTCAA AATGGGTCAT 000400
000401 AACGCAGCAG AGATAACTTG AAACATGAAC AGCGCATTTG GCCCAGGAAC TACTAACGAA CATACAGGGC AGCTGTGATT 000480
000481 CAAGAAGTTT TGCAAAGCAG ACTAGAGCCT TGAATATGAG GAACACAGTG GCCAGCCATT GGATGCTTCA CTTCTTGAAG 000560
000561 CATCTTGACA GCTTTTTGCA GGTGAAATGC TTCCACACCA GCAGGATGCA GAAAAATGCT TTCCAAGAGT TTGTTGAATC 000640
000641 CAGAAGCATG GATGTTTATG CTGCAGGAAT AAACAAATTT ATTTCTCGTT GGCAAAAAAG TGTTGATTGT AATGGTTCCT 000720
000721 ATTTTGATTA ATAAAGATGT GTTTGAGCCT AGTTATAATG ATTTAAAATT AATGGTCCAA AAATGCAATT ACTTTTGCAC 000800
000801 CACCACCAAC ACACACACAC ACCTACACAT TCTGGATTTG AATTCCATGT TGATTATATG CACTTGGAAT ATTTCTTTTC 000880
000881 CATCTGTGGA TTGTTCTGTC ACTTATTTTC TTTAATAAAT GGGTTTCTGA ACCTCTGTTG TATTGACAAA AAAAAAAAAA 000960
000961 AAA

Predicted Small Protein

Name TTC28-AS1_smProtein_515:730
Length 71
Molecular weight 8451.5752
Aromaticity 0.154929577465
Instability index 43.061971831
Isoelectric point 9.13848876953
Runs 8
Runs residual 0.0358784284655
Runs probability 0.0278661013956
Amino acid sequence MRNTVASHWMLHFLKHLDSFLQVKCFHTSRMQKNAFQEFVESRSMDVYAAGINKFISRWQ
KSVDCNGSYFD
Secondary structure LLLHHHHHHHHHHHHHHHHHHHEEEEELHHHHHHHHHHHHHHHLHHHHHHHHHHHHHHHH
HHHLLLLLLLL
PRMN -
PiMo -