TTC28-AS1
Contents
Annotated Information
Approved Symbol
TTC28-AS1
Approved Name
TTC28 antisense RNA 1
Previous Symbols
TTC28AS, TTC28-AS
Synonyms
KIAA1648
Chromosome
22q12.1
RefSeq ID
NR_026962
OMIM ID
_
Ensembl ID
ENSG00000235954
pubmed IDs
11258795
Sequence
>gi|224028239|ref|NR_026962.1| Homo sapiens TTC28 antisense RNA 1 (TTC28-AS1), transcript variant 2, long non-coding RNA
000001 GTGCCCCACC CCGGGCACAC GAGGCCTCCA CTGCGGTTGC GCAGCCTGCC GAAGAGCGTG CGGCTTCTAC TGCGGCTGCG 000080
000081 CAAGCTCGAC GCGCGCACTC TTGTCTGCTT ACGAGGGCTC CTCCCTTCAG CTTTGGTCCC TCGGGGCGTC TGGGCAGCCT 000160
000161 ACGCTTTCCG GATAAAAATG GCAGAATGAA AGAATTATGA GTGGAACTAG AGAATAGGAA AGACATGAAC CAACGCCCAA 000240
000241 AATGAGAAAG AAGGACATAT AAAGAAAAAG ACAAATACAA GTGAAAAAAA TAGACTAATG GATTAACGTC CCTGTCGTGT 000320
000321 GACATTTTCT GACTATGGAA ATGATATTAG ACAAAAAGCA ACTTCAAGTG GTTTTCTTAT TTGAGTTCAA AATGGGTCAT 000400
000401 AACGCAGCAG AGATAACTTG AAACATGAAC AGCGCATTTG GCCCAGGAAC TACTAACGAA CATACAGGGC AGCTGTGATT 000480
000481 CAAGAAGTTT TGCAAAGCAG ACTAGAGCCT TGAATATGAG GAACACAGTG GCCAGCCATT GGATGCTTCA CTTCTTGAAG 000560
000561 CATCTTGACA GCTTTTTGCA GGTGAAATGC TTCCACACCA GCAGGATGCA GAAAAATGCT TTCCAAGAGT TTGTTGAATC 000640
000641 CAGAAGCATG GATGTTTATG CTGCAGGAAT AAACAAATTT ATTTCTCGTT GGCAAAAAAG TGTTGATTGT AATGGTTCCT 000720
000721 ATTTTGATTA ATAAAGATGT GTTTGAGCCT AGTTATAATG ATTTAAAATT AATGGTCCAA AAATGCAATT ACTTTTGCAC 000800
000801 CACCACCAAC ACACACACAC ACCTACACAT TCTGGATTTG AATTCCATGT TGATTATATG CACTTGGAAT ATTTCTTTTC 000880
000881 CATCTGTGGA TTGTTCTGTC ACTTATTTTC TTTAATAAAT GGGTTTCTGA ACCTCTGTTG TATTGACAAA AAAAAAAAAA 000960
000961 AAA
000081 CAAGCTCGAC GCGCGCACTC TTGTCTGCTT ACGAGGGCTC CTCCCTTCAG CTTTGGTCCC TCGGGGCGTC TGGGCAGCCT 000160
000161 ACGCTTTCCG GATAAAAATG GCAGAATGAA AGAATTATGA GTGGAACTAG AGAATAGGAA AGACATGAAC CAACGCCCAA 000240
000241 AATGAGAAAG AAGGACATAT AAAGAAAAAG ACAAATACAA GTGAAAAAAA TAGACTAATG GATTAACGTC CCTGTCGTGT 000320
000321 GACATTTTCT GACTATGGAA ATGATATTAG ACAAAAAGCA ACTTCAAGTG GTTTTCTTAT TTGAGTTCAA AATGGGTCAT 000400
000401 AACGCAGCAG AGATAACTTG AAACATGAAC AGCGCATTTG GCCCAGGAAC TACTAACGAA CATACAGGGC AGCTGTGATT 000480
000481 CAAGAAGTTT TGCAAAGCAG ACTAGAGCCT TGAATATGAG GAACACAGTG GCCAGCCATT GGATGCTTCA CTTCTTGAAG 000560
000561 CATCTTGACA GCTTTTTGCA GGTGAAATGC TTCCACACCA GCAGGATGCA GAAAAATGCT TTCCAAGAGT TTGTTGAATC 000640
000641 CAGAAGCATG GATGTTTATG CTGCAGGAAT AAACAAATTT ATTTCTCGTT GGCAAAAAAG TGTTGATTGT AATGGTTCCT 000720
000721 ATTTTGATTA ATAAAGATGT GTTTGAGCCT AGTTATAATG ATTTAAAATT AATGGTCCAA AAATGCAATT ACTTTTGCAC 000800
000801 CACCACCAAC ACACACACAC ACCTACACAT TCTGGATTTG AATTCCATGT TGATTATATG CACTTGGAAT ATTTCTTTTC 000880
000881 CATCTGTGGA TTGTTCTGTC ACTTATTTTC TTTAATAAAT GGGTTTCTGA ACCTCTGTTG TATTGACAAA AAAAAAAAAA 000960
000961 AAA
Predicted Small Protein
Name | TTC28-AS1_smProtein_515:730 |
Length | 71 |
Molecular weight | 8451.5752 |
Aromaticity | 0.154929577465 |
Instability index | 43.061971831 |
Isoelectric point | 9.13848876953 |
Runs | 8 |
Runs residual | 0.0358784284655 |
Runs probability | 0.0278661013956 |
Amino acid sequence | MRNTVASHWMLHFLKHLDSFLQVKCFHTSRMQKNAFQEFVESRSMDVYAAGINKFISRWQ KSVDCNGSYFD |
Secondary structure | LLLHHHHHHHHHHHHHHHHHHHEEEEELHHHHHHHHHHHHHHHLHHHHHHHHHHHHHHHH HHHLLLLLLLL |
PRMN | - |
PiMo | - |