LINC00682
Revision as of 12:04, 23 June 2016 by Chunlei Yu (talk | contribs) (Created page with "==Annotated Information== ===Approved Symbol=== LINC00682 ===Approved Name=== long intergenic non-protein coding RNA 682 ===Previous Symbols=== _ ===Synonyms=== _ ===Chromosom...")
Contents
Annotated Information
Approved Symbol
LINC00682
Approved Name
long intergenic non-protein coding RNA 682
Previous Symbols
_
Synonyms
_
Chromosome
4p13
RefSeq ID
NR_104143
OMIM ID
_
Ensembl ID
ENSG00000245870
pubmed IDs
26138747
Sequence
>gi|537544659|ref|NR_104143.1| Homo sapiens long intergenic non-protein coding RNA 682 (LINC00682), long non-coding RNA
000001 TCATCATGTA TAAAATGGTG CAGTAGGATG CAAAATTTCC ACTTGTTTAT AAGTGTATCG CCGAGAAATG TATAAAATAA 000080
000081 TCGAGACCGG CGGAGGCAGG TCAGAGCCGT CTGGAATGCG CGCACCTTCA ACGGTATTTG GAGATTATTC GCACTGAATT 000160
000161 TTCTGCCCGC CAAGAACGAA TAGGATTGCC AAGCCACACC ACTTTTTGGA GCCCGCTTAT TCGCGCCTAT CCACCCTCTC 000240
000241 CTGTGCCCCA GGTTCCCTGA GCACGGGAAT CCTTTCCGGG CATGGCCAAG TTTGTTCGGT GGCTCAGAGC GGGAAGGGAA 000320
000321 GTGCAGTTCG ACACCTGTCC AGCTGCTCCG CTTGGAGATC AAAGGCCGGC TATGGGCTGA GCGACAGATT TACGGGACGG 000400
000401 TGGTACAGAT TAAGGCGAGA ACCCTGCCGG TCCTGGACTC GAGTTCGCAC CCAAGGAAAG CGTACAGGTC CCTGGAAGCG 000480
000481 GGTGGATGTC GGAGAGGCCG AGGCAGCCTG CGCTGTGGCC AGGCAGGCTT GGTGGGCTTT AGTCTCAGTA TGTGTTCTTT 000560
000561 AAAGTCTTGA CAGGTTATTA GTAAAGGAAG GGGCACCCCA GGGTCATGAA GATGCTTCTC GCTCTGGCCC AAGCATGCTG 000640
000641 AGGCTCGCTT ATTCCTCGGC CAGGCCCAGT AAAACAGCTC AAGCACAGCC TGGAGTCTTC CCGCATCTGC GCGGGAGTAG 000720
000721 AGTCTGGCTT TGGGCCCCGC GTACCCCGCA GTCGTCGGGG ACCAGTTCGA GGCCACGGGA AGGGTTTCCG CGGCAGGGCG 000800
000801 CGGAGTAAAG AGGGGAAGAA GGAATCCTCT CCGCGTGATC AGTAGGGCGG GCTTGTGATA CTCTCACACC CAGGTTCCAG 000880
000881 CTCAGCCCCC AAACTGCTGC CCCAAGAAAA CAAGTTGGGG AGTGTGGATT TAGACATAAC AACGGGTGTG AGCTGATGTC 000960
000961 CTTACAACCA AAAATATTGA GACTAGAAAT TCAGCTCCGA ATCCACGACC CTCAGATTGA TGCTTAATCG CACCCTCGAC 001040
001041 TCCAGAAAAG CTGCCGGGGA CAGACATGGA CAGGTTTTGC CAAGGGTTCA TTAAAATAGT CTGCACTGGA ATAACCGGGG 001120
001121 TGCAAGAGAT CACGTCTTCA CTCAGGGCTT TGGGGATCCC CTCGTCGCCC CAGGTCAGTG GGTGGGGAGG AGGGCAAACT 001200
001201 TCTGTCTTTT GTTTGTGGGT GAGGGATGCG AATTGTGGCA GCAGCCGAGA AAAGGGGGGA AATTAATTGC AGCCAATTAA 001280
001281 TAATTAATCC CCTTTAAACA GCTTTATTAT CTCTTCTGGG CGACAGAGAT TTGTCTGATA ACCCCCTGAA GACCAAATGT 001360
001361 CAAGTTTAAC CAAATAGTTA TTGCTTTATC AACCCGAGTC TGCAAATAAA TTAATCAAAA GCAAAAAAAA AAAAAAAAAA 001440
000081 TCGAGACCGG CGGAGGCAGG TCAGAGCCGT CTGGAATGCG CGCACCTTCA ACGGTATTTG GAGATTATTC GCACTGAATT 000160
000161 TTCTGCCCGC CAAGAACGAA TAGGATTGCC AAGCCACACC ACTTTTTGGA GCCCGCTTAT TCGCGCCTAT CCACCCTCTC 000240
000241 CTGTGCCCCA GGTTCCCTGA GCACGGGAAT CCTTTCCGGG CATGGCCAAG TTTGTTCGGT GGCTCAGAGC GGGAAGGGAA 000320
000321 GTGCAGTTCG ACACCTGTCC AGCTGCTCCG CTTGGAGATC AAAGGCCGGC TATGGGCTGA GCGACAGATT TACGGGACGG 000400
000401 TGGTACAGAT TAAGGCGAGA ACCCTGCCGG TCCTGGACTC GAGTTCGCAC CCAAGGAAAG CGTACAGGTC CCTGGAAGCG 000480
000481 GGTGGATGTC GGAGAGGCCG AGGCAGCCTG CGCTGTGGCC AGGCAGGCTT GGTGGGCTTT AGTCTCAGTA TGTGTTCTTT 000560
000561 AAAGTCTTGA CAGGTTATTA GTAAAGGAAG GGGCACCCCA GGGTCATGAA GATGCTTCTC GCTCTGGCCC AAGCATGCTG 000640
000641 AGGCTCGCTT ATTCCTCGGC CAGGCCCAGT AAAACAGCTC AAGCACAGCC TGGAGTCTTC CCGCATCTGC GCGGGAGTAG 000720
000721 AGTCTGGCTT TGGGCCCCGC GTACCCCGCA GTCGTCGGGG ACCAGTTCGA GGCCACGGGA AGGGTTTCCG CGGCAGGGCG 000800
000801 CGGAGTAAAG AGGGGAAGAA GGAATCCTCT CCGCGTGATC AGTAGGGCGG GCTTGTGATA CTCTCACACC CAGGTTCCAG 000880
000881 CTCAGCCCCC AAACTGCTGC CCCAAGAAAA CAAGTTGGGG AGTGTGGATT TAGACATAAC AACGGGTGTG AGCTGATGTC 000960
000961 CTTACAACCA AAAATATTGA GACTAGAAAT TCAGCTCCGA ATCCACGACC CTCAGATTGA TGCTTAATCG CACCCTCGAC 001040
001041 TCCAGAAAAG CTGCCGGGGA CAGACATGGA CAGGTTTTGC CAAGGGTTCA TTAAAATAGT CTGCACTGGA ATAACCGGGG 001120
001121 TGCAAGAGAT CACGTCTTCA CTCAGGGCTT TGGGGATCCC CTCGTCGCCC CAGGTCAGTG GGTGGGGAGG AGGGCAAACT 001200
001201 TCTGTCTTTT GTTTGTGGGT GAGGGATGCG AATTGTGGCA GCAGCCGAGA AAAGGGGGGA AATTAATTGC AGCCAATTAA 001280
001281 TAATTAATCC CCTTTAAACA GCTTTATTAT CTCTTCTGGG CGACAGAGAT TTGTCTGATA ACCCCCTGAA GACCAAATGT 001360
001361 CAAGTTTAAC CAAATAGTTA TTGCTTTATC AACCCGAGTC TGCAAATAAA TTAATCAAAA GCAAAAAAAA AAAAAAAAAA 001440
Predicted Small Protein
| Name | LINC00682_smProtein_281:379 |
| Length | 32 |
| Molecular weight | 3576.1401 |
| Aromaticity | 0.09375 |
| Instability index | 68.215625 |
| Isoelectric point | 9.48919677734 |
| Runs | 5 |
| Runs residual | 0.0353954081633 |
| Runs probability | 0.0190955661544 |
| Amino acid sequence | MAKFVRWLRAGREVQFDTCPAAPLGDQRPAMG |
| Secondary structure | LHHHHHHHHLLLEEEELLLLLLLLLLLLLLLL |
| PRMN | - |
| PiMo | - |
