LINC00322

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Revision as of 14:01, 23 June 2016 by Chunlei Yu (talk | contribs) (Annotated Information)
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Annotated Information

Approved Symbol

LINC00322

Approved Name

long intergenic non-protein coding RNA 322

Previous Symbols

C21orf136, NCRNA00322

Synonyms

FLJ16545

Chromosome

21q22.3

RefSeq ID

NR_103713

OMIM ID

_

Ensembl ID

ENSG00000237864

pubmed IDs

17081983

Sequence

>gi|574957315|ref|NR_103713.2| Homo sapiens long intergenic non-protein coding RNA 322 (LINC00322), long non-coding RNA

000001 TGACCCTCCA AGTTGGGAGT TTCGAGGACC CCCTGAACTT AGAGCTCCTG GGCCGTCTTT CCCTGAGAAT GAAGCCAACA 000080
000081 CAGGCAGGAT TGAGCTTAGA GTCTGAATTA GATGGTGCCT AGTGACCGCC TCTGAACTCC TGGACCCAGC TACACCTGAA 000160
000161 GCCACTCTAC CCCACATTTT CTAGGACTTT CCTGTATGAC TGCATGGCTA ATAGCACTTC TCCTCGACAC CGGTGCTGTT 000240
000241 CTCGGAATCC TATCTAGAGC TTACAGCTTT CCCAGCCTCC TGGCTGCCTC CCCATTTCCT CCCACACTGG TGATCCCCCG 000320
000321 ATGAAATCCT CCTGCCCTTC ATCCTGTCTT GGCGTCTGCC TCGCGATGAC CCTGGGCTCA CAGTCTGGCC ACTGCAGCTG 000400
000401 AGTGTCGCAC TGGCTCAGGT GTGGCAACAC GGGGGTTGAA AGGCTCTGAA CCAGGCACCA GGAGCCCTGC GCCCCAGGCC 000480
000481 AGCCCTCCGC AAACCAGCTT TGTGTCCTCG GACAACTCCA GGCCCATCCT GGGTCTTGCT GTCTGGAGAG AGGAGGAAGC 000560
000561 CGGCCACACT CTCCAAGAAC ATTCAGCCTC CGCACTGCAT GGCCTCTGCT TGGTTTCTGG CTGGGCCCAG GGCTCTGCTT 000640
000641 GCAGTGTGGA GCCGCAGTGG TGGGTCCCCA TGCGAGCCCC CGCCACTGTC TGCTGTCATC ACCGGCCCAG ATGCCCTTGC 000720
000721 CACACAGCAC CATTTCCAAC TGCGAAGGCC TCCGTGTGGC GCCTGTCGGG ACAACACGGC CGGCACAGGC TGGGCTGGGG 000800
000801 GAGAAAGGGT GCTGGGCAGC TCTGTGCCCT GCGACTTTGT GGGTCTGCTG GGCTGTCCTT GTCTTGAAAA CATTGTATTT 000880
000881 TTGACTCCTA TAAAGTAGTG GAGATAA

Predicted Small Protein

Name LINC00322_smProtein_710:883
Length 57
Molecular weight 6099.2
Aromaticity 0.0877192982456
Instability index 42.4789473684
Isoelectric point 8.48992919922
Runs 9
Runs residual 0.00394736842105
Runs probability 0.0574201652633
Amino acid sequence MPLPHSTISNCEGLRVAPVGTTRPAQAGLGEKGCWAALCPATLWVCWAVLVLKTLYF
Secondary structure LLLLLLLLLLLLLLEELLLLLLLHHHLLLLLLLHHHHHLLLHHHHHHHHHHHHHHLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTo