NGF-AS1

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NGF-AS1, is a SNP containing long noncoding RNA associated with Dysmenorrhea.

Annotated Information

Approved Symbol

NGF-AS1

Approved Name

NGF-AS1:

Characteristics

NGF-AS1 is a conserved antisense lncRNA gene that spans the NGF gene [1].

Function

NGF-AS1 plays a role in regulating NGF levels [1].

Regulation

NA

Diseases

  • Dysmenorrhea [1]

Expression

Expression of NGF-AS1 is increased in the non-arterial tissues that are associated with increased dysmenorrhea[1].

Labs working on this lncRNA

  • Obstetrics and Gynecology, Graduate School of Medicine, The University of Tokyo, Bunkyo-ku, Tokyo, 113-8655 Japan
  • StaGen Co., Ltd., Taito-ku, Tokyo, 111-0051 Japan
  • EverGene Ltd., Shinjuku-ku, Tokyo, 163-1435 Japan
  • Life Science Group, Healthcare Division, Department of Healthcare Business, MTI Ltd., Shinjuku-ku, Tokyo, 163-1435 Japan

References

  1. ↑ 1.0 1.1 1.2 1.3 Cheng CS, Spengler RM, Keiser MS, Monteys AM, Rieders JM, Ramachandran S et al. The long non-coding RNA NEAT1 is elevated in polyglutamine repeat expansion diseases and protects from disease gene-dependent toxicities[J]. Hum Mol Genet. 2018, 27(24):4303-4314.

Sequence

>gi|112840934|ref|NR_157569.1|Homo sapiens NGF antisense RNA 1 (NGF-AS1), long non-coding RNA

000001 GTTCCGTTCA GGCCTGTGCG AGAAAGACTC CCAGGCCCCT GGGTTCTCCA TAGCCCACAC TTCCACTCGG CTCCGCTTCT 000080
000081 CTTGCCCAGC TGTCTCTCCT CCAAGGAGCG GACAGGGCGG ACACGAGACC CGGGTGCCCT TTTGTCCTCT ATTCCAGCTC 000160
000161 TGGGCGGATC CTCCTCCCAT GATGTGGATG ATGCTGAGGA GAAAGTGGAA GACGGGTCTG AAGAAGCAAG GACTGGCAAG 000240
000241 TCTGATCCCC CACTCTGATT CTCATTGCTG AATGTCTGGG TCTTCCTTGT GTACCTGCTG GGGTGGGAGA CTGCTCGCAG 000320
000321 CATACCTGGC CTATGACATG CCTAGCTCTC TGGGGTGGAT CTTGGACAGG AAGACTGCTT CTGCCAGAGT AAAGAATATG 000400
000401 ACGGAGCTCC TCATCCGATG GAGCCTCTGG GAAGAGGCGA AGAGCCAGCT GGAAGCCTGG TGGGCCTCCG CTGCCAGCAG 000480
000481 GACAGATGCA TCAAGTCAGG TTTATGGGAG AAGTCTTCCC AGACCACTAT GTCCAAACTT CTGTCCATCC TGCTATAACC 000560
000561 TCTCCAGTTA GATGGATGAA AACCAGACCA GTCAGCCATG GACCAGAGCT GCAAAGATAA GAACCCAAAG AAGAAACAAA 000640
000641 TGGTGTAGCA TTAAGTATTT CTTTCCACTT GAGCAGAAAA ATCGGAGACT AAGGGAACTG GAGGAGTGTG GCCTTTGAAT 000720
000721 GAGACTTGAG GTGGTGAGAC AGCAAGTGAA CGTGGGGATA CTTGCTCAGA GCTTTGCTAG AATACCTCAT GGTTTACTGG 000800
000801 ACCTAGGACC TTCTTGATAT AGAAATGACC ATAAAAAGAA AGCAGACAGA TTCCCATGAA GAAAAAGTGA CCTCTCCTCT 000880
000881 GAATTCCATG CTTGGAAAAG TACTTATTTA AAGGAAGGAA AAAAGTCTCC AAAGCAAAAC CTGGCTTGTT TAGATAACTT 000960
000961 GGTCTAGGAA CATGGCGGAA GCTGAACCCA AGAACATGCC TGCACAGTGC AACTTCTGGG TGGGAGTCAG TTGTCTTTTC 001040
001041 TGAGTTCCCT GGACCTGAGA GTGTGACACT GAGACCAGGG GTGTGGAGAA ATCTATCTCA TATTTATGAC ATGTGGTGGG 001120
001121 ATCTTTACTG AGCATTTCAA CCCATCCTGT AGTAAAGAGT GCTGAATCAT GGTGGGTCAC CCTTCTAGAC TAGAGACAGC 001200
001201 CTGGGTGGGT TCACTGGAAC CAGCCAAAAT GGCCACAGGA CCAGCTTGAG TCTCCACTAC AAAGGGCAGG TGAGGGGAGC 001280
001281 AGGAGGTAGA ACGTTCACAG GACAGGACGA TCAGGAGCAG AGAGTTGCTC TAAGATATGA GCACCAGATG GGGAAATTTA 001360
001361 ACAGAGTGGA CTGTAGAGTC ACTTGGAAGG AAAAATGGAA GAGGATTTTA TATTACAGCT GCTGTCAATG GTTCTAACCT 001440
001441 TGTAGAAATC TATAGGTAAA AATATTGTGA AATTACATAT GCCCTTTGTT TTCACTTAGT TTTTAATTTC GCTTACTCTA 001520
001521 ATTACTAGCT TTTCAATATA GGTTTAAAAA GCAGTTATCA GATTTTTATT AATTAAGATA GAAGAAATCT TTTCTCATAG 001600
001601 ACTATTTAGT TTTTTATTTT GAAATTATGT TAAACTTATA GAAAAATTTA CAAAAATAGT ACAGAGAGTT CCTGTATATC 001680
001681 CTTCAACTAG CTTTCCCTAG TGTTACTGTC ATACTTAACA ATAATACATT GATCATAAAT AAGAAATGAA CATTGGTACG 001760
001761 ACACTATGGG CCTAACTACA GACGTTATTC CACTAGTATC CTTTTTCTGG CTCAGGATCC AATTCAGGAT CTCAAATTGC 001840
001841 CTTTAGTTAT CACGACTCCC TAGTCTCTTC CAATCTGTAA TTGTCCCAAA TTTTTCTTGA CAACTTCAAC ATATGTTTTT 001920
001921 AAAACTTTTT ATTTTGAGAT AACTTTAAAT TCACATGCAG TTGCAGGAAA TAATACAGAG AGATCCCTAT ATTCCTCACC 002000
002001 TAGTTTCCCC CATTGGTAAC ATCTCAATAA CTATGGCATA ATATCACAAC TTGGAAATTC ACATTGATGA GGTACATGGA 002080
002081 TCTTCTTCAG ATTTCACCAG TTTCACATGG ACCTGTGTGT ATCAGTGTGT GTGTGTGTGT GTGTGTGTGT CTGTTTGTAT 002160
002161 CAGTTCTGTG CAGTTTTATC ACATGTGTAG ATTCATATGG CCACTACCAG AGAACAGTTC TATCACAAGG ACCCCCAGTG 002240
002241 CTACCCTTCT ATAGCTATTT CCGTTTATCC CCAGCTCCCA ATCCCTGGCA GCCATTAATT TGTTCTCTAT CTCTATAGTT 002320
002321 TTGTCATTTC AAGAATATCA TATAAATAGA GTTATACAGT ATGTAATCTC TTGAGATTGG CTTTTTTTCA CTCAGCCTAA 002400
002401 TTTTCTTGAG ATCCATCCAT GTTGTTGCAT TGGTCAATAA TTCATTCATG TTTCTTGCTA AGTCGTACTC CATGGTTTGA 002480
002481 TGGACCAGTT TGTTTAGGCA TTCAATTGTC GAAGGACATT TGCACAACCT CAGTTCTTTT GAAGTCAGTT TTTGTAGAAT 002560
002561 GTCTTTTGAT TTGAGTTGGT CTGATGTTTT CACATATTTA GATCATGGCA
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