ENST00000446372.2

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000446372.2

Source

Gencode19

Same with

lnc-C10orf31-7:8

Classification

intergenic

Length

693 nt

Genomic location

chr10-:10826402..10836877

Exon number

4

Exons

10826402..10826632,10828608..10828698,10834335..10834488,10836661..10836877

Genome context

Sequence
000001 CTTGGCAGAG AGCGCCCTGG GAAATGCGGA TATAGAAGGT CAGGAGAACA TCTCTCCTGG TTATACAGCA TTCCAGGTGG 000080
000081 GCTTTCATGT GGTTGAGGAT AATATCATTA GCACCAAAGG TGAAAATCCG TGGAAGCTCA TCTTATTTCA GCAGAAGAGT 000160
000161 AGGATGGGCC TTGTGGCACG AGTAAGCCAA ACAAGGGAAA GGCATTCACC ATCAATTGAC TCCTCATCTG TTTTTAAGAG 000240
000241 GGAAATCTGA GTTTTCAAGG AAAGCCGAAT ACAGTTGCCA AGTTGCCAGT CAAAGAAACA ATGTCAACAC CTGCTCATAG 000320
000321 AGATGGAATT CCTAACCCGG AATATTGCCC TTGAATTACA ACGAGAAAAA GCACCTCTTC AAGTGAGATG GCAGACCACC 000400
000401 TCAGGATGGA AATGTATTTC TTCATCCCCC TCTCTACTTC CCTGTGACCT CCTGCAAATA AGGGAGAGAC AAAGAGAAGA 000480
000481 GCAGAAGAAC AGAAGAATGG AGTGGCAAAG AGAAGAGAAG GAGTGACTGA ACATTGACAA GACTTTGGTT GGGGATGGTC 000560
000561 AGAGAGGAGA TTAGCTGCTA GACGGCCACA CTGCGGAGAA AGATCATTTT CCCACTCCAT CCCCCTTCCA GCTCCCCATC 000640
000641 CATCTCACCA AGAGCCAGCT CCACCACTCA ATAAAACCTT ACATTCATCT TTC
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Predicted Small Protein

Name ENST00000446372.2_smProtein_86:184
Length 33
Molecular weight 3831.4964
Aromaticity 0.15625
Instability index 63.984375
Isoelectric point 11.567565918
Runs 7
Runs residual 0.0271045918367
Runs probability 0.0238852297676
Amino acid sequence MWLRIISLAPKVKIRGSSSYFSRRVGWALWHE
Secondary structure LEEEEEELLLLEEEELLLLHHHHHHHHHHLLL
PRMN -
PiMo -