ENST00000506664.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000506664.1

Source

Gencode19

Same with

lnc-MEF2C-2:16,NONHSAT102659

Classification

intergenic

Length

762 nt

Genomic location

chr5-:87836329..87907594

Exon number

3

Exons

87836329..87836941,87837853..87837888,87907482..87907594

Genome context

Sequence
000001 CAGAGATAGA AGATAAGGCT CTGCCCACAG TCTCCAGGCT GCAGCATCTG GTGAGGAAGG GAAGGTGTAT GGCTGCATTG 000080
000081 TTTTTCTCTT GGTGTTCAAC TGGAATAGAG CAGGAAATTG CTTTGGAGAT GAGGAAACAA ACTCTTATGG AGACCTAAGA 000160
000161 GACTGAAGAC ATCTGGCGTG GACTACTCTG ATGGTAAAAT TGAAAGTACA CCTAAATTTG CTTTGTTACA GGATTCTCTT 000240
000241 CAGAGGACAA GAGAAGATGT TACATTCTCT GCATGAGGAC AATTCTGCAG CATCAAAATC GAATAATATT TGTTTTCTGG 000320
000321 CAGCAGAATT TTGTATCATA TTTCTAAAGA CAGTAAGCAC TTGGGTGGAC GTCAATGAAT ACTAAACACT AATTGATCTG 000400
000401 ATACAGCCGT ATGCACATAC ACAGATATAC ATGGTGGCTT GTAATGGTTG AAAAATTACG GTTTGGTTTT ATTAAAAGAT 000480
000481 CTGTCACTTT TAGGTCAGAG TGGGATTTTG GAGGGATAGT CTCCCACAAT AGAAAACTAC CCTGACAACA GTGGTGTTTT 000560
000561 GAGGTTGTTT GTTGTTTGGC TTCTTGATGA TGCTTAGCTA AGGAGACACT TCCTTTCAGA TTCTGTCTTC CAAACCCCAG 000640
000641 GGCTCTGTTC TGGGCAGTTC AGCCTAATGG AATTAAGCCT GACATGTTTC AACTCTATTT CTTGATAAAA TAAACATAAA 000720
000721 ACAATGGTTT AGATTTCGAA TAAAACTCTT GAAGCATGGG GT
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Predicted Small Protein

Name ENST00000506664.1_smProtein_410:544
Length 45
Molecular weight 5462.3651
Aromaticity 0.181818181818
Instability index 66.125
Isoelectric point 10.9467163086
Runs 8
Runs residual 0.0187165775401
Runs probability 0.0400878819997
Amino acid sequence MHIHRYTWWLVMVEKLRFGFIKRSVTFRSEWDFGGIVSHNRKLP
Secondary structure LLEEEEEEEEHHHHHLLLLEEEEEEEEEEEELLLLEEELLLLLL
PRMN -
PiMo -