ENST00000504719.2

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000504719.2

Source

Gencode19

Same with

lnc-MYC-2:1,NONHSAT147662

Classification

intergenic

Length

754 nt

Genomic location

chr8+:128806779..128903221

Exon number

3

Exons

128806779..128806980,128867401..128867565,128902835..128903221

Genome context

Sequence
000001 CTCCGGGCAG AGCGCGTGTG GCGGCCGAGC ACATGGGCCC GCGGGCCGGG CGGGCTCGGG GCGGCCGGGA CGAGGAGGGG 000080
000081 CGACGACGAG CTGCGAGCAA AGATGTGCCC CGGGACCCCC GGCACCTTCC AGTGGATTTC CTTGCGGAAA GGATGTTGGC 000160
000161 GGTCCCTGTG ACCTGTGGAG ACACGGCCAG ATCTGCCCTC CAGACCATAG CTGTCTGCAG TGCAGGAAGC CAACTATTAA 000240
000241 GGGGAAACAA AAGTGTTCTT AGGAGTCCTG CTGTCACTGT GGATTGAGCC GGTGAAGCCC TGAGGGATTT CATCGCTGAG 000320
000321 GTGGATGGAG AAGCAGCTGG GGGCCTTGGC TGTAAGGACC CCTAAGGGCC TGATCTTTTG GCCAGAAGGA GATTAAAAAG 000400
000401 ATGCCCCTCA AGATGGCTGT GCCTGTCAGC TGCATGGAGC TTCGTTCAAG TATTTTCTGA GCCTGATGGA TTTACAGTGA 000480
000481 TCTTCAGTGG TCTGGGGAAT AACGCTGGTG GAACCATGCA CTGGAATGAC ACACGCCCGG CACATTTCAG GATACTAAAA 000560
000561 GTGGTTTTAA GGGAGGCTGT GGCTGAATGC CTCATGGATT CTTACAGCTT GGATGTCCAT GGGGGACGAA GGACTGCAGC 000640
000641 TGGCTGAGAG GGTTGAGATC TCTGTTTACT TAGATCTCTG CCAACTTCCT TTGGGTCTCC CTATGGAATG TAAGACCCCG 000720
000721 ACTCTTCCTG GTGAAGCATC TGATGCACGT TCCA
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Predicted Small Protein

Name ENST00000504719.2_smProtein_32:286
Length 85
Molecular weight 8952.139
Aromaticity 0.0119047619048
Instability index 60.1785714286
Isoelectric point 11.0068969727
Runs 14
Runs residual 0.0326812253564
Runs probability 0.0495243142302
Amino acid sequence MGPRAGRARGGRDEEGRRRAASKDVPRDPRHLPVDFLAERMLAVPVTCGDTARSALQTIA
VCSAGSQLLRGNKSVLRSPAVTVD
Secondary structure LLLLLLLLLLLLLHHHHHHHHHLLLLLLLLLLLHHHHHHHHHLLLLLLLLHHHHHHHHHH
EEELLLEEELLLLEEEELLLEEEL
PRMN -
PiMo -