ENST00000592836.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000592836.1

Source

Gencode19

Same with

NONHSAT075785

Classification

antisense

Length

595 nt

Genomic location

chr2+:179393467..179403630

Exon number

5

Exons

179393467..179393540,179400459..179400555,179402331..179402418,179402957..179403086,179403425..179403630

Genome context

Sequence
000001 CTCTGTGACT GGCTTGCTTG ATGGTTAGGG TCTGATCGCT GCCTGAGACA CCATATCGGT ACTCCTCAGA GTTGGTGATC 000080
000081 ACAGGATCTG GTTTGCCACT GAAAGGAATC TTGATGCTGA CCACTTCACC TCGGAGAGCA TGAACTGCTC CCATGCCTTC 000160
000161 AAGAGTTTTA GTGGGTAACC AGGATGGAAC TGCGGTGTTG CTTGCAGGAG AAGCTTACTA CTGGTTTCTA CTTCTCCAAC 000240
000241 CTCATTGGTG GCTATGCAGG TTCATTGAAG TGGCATACAA TTGTTGACCT TTCAAATCTT GTTGGGAAAT ATTTTTAAAA 000320
000321 AGAAACCATT GCATTAGAGG GAATTACTCA AGGAAAGTGC TCAGTTCACT CCATCTAACA TCTGCTGAGG CACTGTCTCC 000400
000401 AGACTGTCTA TATTCAACCC AGTATCCAAG AATTTCTTTA CCACCATCAC ATTCAGGTTT CTCCCACTGT AGAGTGACAC 000480
000481 TATCTTTGGA TATTGAAAGA ATCTCAAGTT CTCCTGGTTG GCTTGGTTTA TCTGAAATAT TTTAAAATAA TGAAAAGGGA 000560
000561 GTCAGCTTTA CTGGTGAAAT AAAAGGACCA AACAT
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Predicted Small Protein

Name ENST00000592836.1_smProtein_152:286
Length 45
Molecular weight 5144.9456
Aromaticity 0.181818181818
Instability index 47.3909090909
Isoelectric point 5.42572021484
Runs 7
Runs residual 0.00401069518717
Runs probability 0.0357710651829
Amino acid sequence MPSRVLVGNQDGTAVLLAGEAYYWFLLLQPHWWLCRFIEVAYNC
Secondary structure LLLEEEEELLLHHHHHHHHHHHHHHHHHLLLHHHHHHHHHHHLL
PRMN LLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLL
PiMo oooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiii