Lnc-TNRC6A-1:1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	lnc-TNRC6A-1:1
Source	LNCipedia2.1
Same with	NONHSAT141165
Classification	intergenic
Length	5246 nt
Genomic location	chr16+:24715881..24721546
Exon number	2
Exons	24715881..24717945,24718366..24721546
Genome context
Sequence	000001 GAGGCTGAAG CAGGAGAATC ACTTGAATCT GGGAGGTGGA GGTTACAGTG AGCCAACATC ACACCACAGC ACTCCAGCCT 000080 000081 GGGTGACAGA ACAAGACTCC GTCTCAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAGAAAG AAAAAAATTA TGACATTAAG 000160 000161 TGAGTATAAG GGGGTATATT ATTTACGTAC TCACTTTTGT AGCAAATCCC CCAGCTGTGC ACTTTTCTGG GTGCATGCAA 000240 000241 TACTTTCACA AGTAAATAAA TATCTTTATT TAAAACAGTA ATAACAGAAA ATCTCAGCAC ACTAGGGCAC GATGGTTCAC 000320 000321 ACCTGTCCCA GCACTTTGGG AGGCTGAGGC AAGAGGATCA CTTGAGGCCA GGAGTTTAAG ACCAGCATGG GCAACATAAC 000400 000401 GAGACCCTGT CTCTACAAAA AAATTTAAAA TGAACTTAAA TTTTTTTTAA TTTTTAAAAA GCTTAGCGCA AGTGGAGTCA 000480 000481 TTCTAGAAAG GTGATGCTAA TGATTAGTAC CTATATGGTA TTTACTATGA ACCAATCACT GTTCAAAACA CCTTATTTAT 000560 000561 ATTTATTCAC TTAAATCCAG CAACAACCCT TTGAGCTAGA TGCTATTATT AATTTTGTTT TACAGAGGCA GCAACCAAGG 000640 000641 CACAGAGAGG CTAAGAAACT TGCCCAGATC ACACAGTTAA TGCATGGCAC ATCTAGAATT TCTAGAGTCT AGAACCAGCC 000720 000721 AGGATGGCCT CTCAAACTCT ATCTTATACA GACTATCTAT TGATATTAGA TGAATTTTTT TTTTTTTTTT GAGACAGAAT 000800 000801 CTCACTGTGT CACCCAGGCT GGAGTGCAGT GGCACGATCT CAGCTCACTG CAGCCTCCAA CTCCCGGGTT CCAGTGATTC 000880 000881 TCCTGCCTCA GCCTCCCAAG TAGCTGGGAT TACAGGCACA TGCCACCATG CCCAACTAAT TTTTGTAATT TTAGTAGAGA 000960 000961 TGGCGTTTCG CCATGTTGGC CAGGCTGGTC TCGAACTCCT GACTTCTGGT GATCCGCCTG CCTTGGCCTC CTAAAGTGCT 001040 001041 GGGATTACAG GCATGAGTCA CCGCACCCAG CCTTAGGTGA ATTCTTAATA CTGGTTAAAT GAGAATAACT ACATGACCTT 001120 001121 TCTTAGAGAC TACAAGAATA TTTAACAAAA TTCAATATCC AGTATTGATA TGATAAAAAC ATATTTAAGT TTAAAAATAG 001200 001201 CATCTTGTTT AATGTTGCAC ACTAGAAGCA TTTTCCATTA AAGTCAGGAA CAGGGTAAGA GAAATAATAT TTCCACTTAT 001280 001281 TTAATATTAT TCTAGGTATA TAAAGATAAA AAATACAAAT TTTAAGAATT ACAAAGTGGA GACAACATAA TGACTATTTG 001360 001361 CAGGTAATAT GATTGCATAT CTAGCCAATC CAAGAGTACT CCTGGAAAGT CTCTCATAAA CAATGAGTTA AGTCAGTAAT 001440 001441 GTAGTTGGTT ACACAATCAA CAGCACTTCT ATGTTTCAGG GAAAAAGCTA GGAAACAAAA TGGAAGAAAA CCTTGTACTT 001520 001521 AAAATAGCAC CAACGCTCAC ACTTACAACA TCAGCAACAA CAAAAATGTA GGAAAATGAA AGAAGAAATA AATGAAAATA 001600 001601 CACACTTTGT TCATCAATTA GAAGATTTCA TGATGTAAAG ATGCACATTC TCCCTAAATT AAACTTAACC TTTAATTTTA 001680 001681 TATCAATAAA AATACATTAT GAGGTTTTTT TGGAAGTAGC CTCATTGAGT CTAAAGTTCA AATGGAAAAA TAAACAAGTG 001760 001761 AGGCTAGCCA GGAAAATTTT GAAAAAGGAA AGTAATAAAA AAGAATTAAC CCTCCTAGGT ATTGAAGCAC ATTATAAAGC 001840 001841 TACATTTATA TTTTTAAAAG TTTAGTACTT GGCCGGGCGC AGTGGCTCAC GCCTATAATC CCAGCACTTT GGGAGGCCGA 001920 001921 GGTGGGTGGA TCACGAGGTC AGGAGATCGA GACTATCCTG TCTAACACGG TGAAACCCCA TCTCCACTAA AAATACAAAA 002000 002001 AATAAAATTA GCCGGGCGTA GTGGCGGGCG CCTGAAGCAG GAGAATGGCG TGAACCCAGG AGACGGAGTG CAGTAGCACG 002080 002081 ATCTCAACTC ATTGCGGTCT CTGTCTCCAG GGTGCAAGAG ATCCTCCTTC CTCACCCTCC TGAGTAGCTA GGGCCACAGG 002160 002161 TGCATGCCAC CACACTTGGC TAATTTTTGT ATTTTTAGTA GAGACAGGGT TTCAACATAT TGGCCAGGCT GGTCTCAAAC 002240 002241 TCCTGACCTC AAGTGATCCA CCTGCTTTGG CCTACCAAAG TGCTAGGATT ACAGGCATGT GCCACCGCAT CCAGCCAGAT 002320 002321 AAACAATTTA AATGTAAATA AATAAAACAG GATGAAAGGG GAACATGGGC GCACACACAC ACACACACAC ACACACACAC 002400 002401 ATCTTAAATA AGAGAAAATC TTTCTAAGCC AGACACAAAA CTCAGATGCT AAAAAGAAAA AATTAGCTAC ATAAAATTCA 002480 002481 AAATAGCTGC ACAGTATAAA AATACCATAG GCTAAATTAA AAGGTAGGTA ACAAGCTAGG AGAAATGTTT CTACAATTCA 002560 002561 TGCAACAGAC GAAGAATAAA TGTCCTTAAT AAACAAAGAG CTCTTATAAT TAAAAAGAAA AAATATGAAT AGTTTTTAAA 002640 002641 TTGGGCAAAG AATGATGTAG CTCACAAAAA AAGAAATATA AATTGCTCAT AAATACATAA AAACACACAA AAAATTTCTC 002720 002721 AACCTTACTA GTGACTAAAG ACATACAAAT TAAAGTGAGA TGAGTTGGCA AAGATAGTGT TAAATAATGG CCACAATGGG 002800 002801 CCAGTGCGGT GGCTCACGCC TGTAATCCCA GCACTCTGGG AGGCCAAGGT GGGTAGACGT CTTGAGGCCA GGAGTTCAAG 002880 002881 ACCAGCCTGG CCAACATGTC AAAACCCTGT CTCTACAAAA AATACAAACA TTAGCCCGGT GTGATGACAC GTGCCTGTAA 002960 002961 TCTCAACTGC TCAGAAGGCT GAGGTGGGAG GACTGCTTGA GTCTGGGAGG TGGAGATTGT AGTGAGCTGA GATCGTGCCA 003040 003041 CTGCACTGCA GCCTGGGTGA CAGAGTGAGA CTCTGTCAAA AAAAAAAAAA CACACACACA CACAATGAGT GAGAGCAGAA 003120 003121 CAAGCAGGTG CTTTCATAAA TTGCTGGTGA GGATGAAAAC TGACATGCTC TTCGTTTTTG TTTGGTTGGT TTTTGGGGGT 003200 003201 TTTGGTTACT GTAACTTTTT CCAGTAGTTT TTGGGGTACA GGTGGTTTTT GATTACATGG ATGAGTTTTT TTTTTTTTTG 003280 003281 AGACGGAGTC TCGCTCTGTC GCCCAGGCTG GGGTGCGGTG GCGCGATGTC AGCTCACTGC AAGCTCCACC TCCCAGGTTC 003360 003361 ACGCCATTCT CAGGCCTCAG CCTCCTGAAT AGCTGGGTCT ACAGGCACCC GCCACCACGC CCGGCTAATT TTTTTGTATT 003440 003441 TTTAGTAGAG ACGGGGTTTC ACCATGTTAG CCAGGATGGT CTCGATCTCC TGACTTGGTG ATCCGCCAGT CTCGGCCTCT 003520 003521 CAAAGTGCTG GGATTATAAG CGTGAGCCAC CGCCCCCAGC CATGGATGAG TTCTTTAGTG GTGAATTCTG AGACTTTGGT 003600 003601 GCACCCGTCA CCCTAGCAGT GTACAGTGTA CACTGTCTCC AATATGTAGT CTTTTGTCTC TCACCCACCT TCCAACCTCC 003680 003681 CCCTTCGAGT CCCCAGAGTC CATTATATGG CTCTGTATGT TTTTGCATCC TCATAGCTTA GCTCCCATTT ATAATTGAGA 003760 003761 ACATACCGTA TTTGGTTTTC CATTTCTGAC TTACTTCACT TAGAATAATG GCCTTCGGTT CCAACCAAGT TGCTGCAAAA 003840 003841 GACATTATTT TGTTTCTCTT CGTGGCTCAG TAGTATTCCA TGATACACAT ATGCCATATT TTCTTTATCC GCTGATTGGT 003920 003921 CAGTGGGCAT TTAGGTTGGT TCCATAGCCT TGCAATTGTG AATTGTGCTG CCATAAACGT AAGTGTGCAT GTGTCAGCCA 004000 004001 AGCACAGTGG CTCACGCCTG TAATCCCAGC ACTTTGGGAG GCTGAGGCAG GCAGATTGCC TGAGGTCGGG AGTTCGAGAC 004080 004081 CAGCCTGATC AACATGGAGA AACCCCGTCT CTACTAAAAA TACAACAATT AGCCGGGCGT GGTGGTGCAT GCCTGTAATT 004160 004161 CCAGCTACTC GGGAGGCTGA GGCAGGAGAA TTGCTTGAAC CCAGGAGGTG GAGGTTGCGG TGAACCGAGA TCATACCATT 004240 004241 GCACTCCAGC CTGGGCAACA AGAGTGAAAC TCTGTCTCAA AAAAAAAAAA ATGTTTGGGT GTGACTTTTT CATATAATGA 004320 004321 CTTCTTTTCC TTTGGGTAGA TACCCAGTAT TGAGATTGCT GGATTAAATG GTTGATCTAC TTTTAGTTCT AAATTTAAGG 004400 004401 AATCTCCATA CTGTTTTCCA TTGTGGTTTT ACTAATTTAC ATTCCCACCA GCAGTGACGC ACTCTCCTTG AAAGGCAAAT 004480 004481 TAACATTTTT GATCACATTT TAAAATGTTC ATTGAGTTTC AGGTCAAGGC TAAGTGAGGA AAAATAAATA AAATGTTTAT 004560 004561 ATTGGCCAGG CCTGGTGGCT CACACTGTAA TCTTAGCACT TTGGGAGGCT GAGGTAGGTG GATCGCTTAG AGGCCAGGAG 004640 004641 TTCCAGTCCA GCCTGGGCAA CATAGAAAGA CCCCATCTCT ACCAAAAATA CAAAAATTAG CTGGGCATGG TGGCACAAGC 004720 004721 CTGTAGTCCC TGCTATGCGG GAGGCTGAGG CAGGAGGATC ACTTGAGCCC AGGAGGTCGA GACTGCAGTG AGCTATGATT 004800 004801 ACACTATTGC GTGCCAGCCT GGGCAACAGA ACAAGACCCT GTCTCAAAAA AAAAAAAAAA AAGAAGTTTA TATTCTTTGA 004880 004881 CTCGGCTATT CCACTTCGAT GATTCTCTGT CACAGGTGTC TTAAATACAT GAACAAAGGT ATAAATTTTT TTTAAATTTG 004960 004961 TAAATATGCT GGGCGCAGTG GTTCACACCT GTAATCCCAG CACTTTGAGA GCCCAAGGCA GGCAGAGCAC CTGAGGTTGG 005040 005041 GCGTTCAAGA CCAGCCTGAC CAACATGGAA AAACCGTCTC TACTCAAAAT ACAAAATTAG CCAGGCGCAG TGGCACATGC 005120 005121 CTGTAATCCC AGCTACTCAG GAGGCTGACT CAGGAGAATC CCTTGAACCC AGGAGGTGGA GGTTGCAGTG AGCCGAGATC 005200 005201 GCGCCATTGC ACTCCAGCCT GGGCAACAAG AGCGGAACTT CATCTC

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