Lnc-ITPR3-1:1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	lnc-ITPR3-1:1
Source	LNCipedia2.1
Same with	NONHSAT109860
Classification	intergenic
Length	7160 nt
Genomic location	chr6+:33857867..33885968
Exon number	3
Exons	33857867..33861167,33881865..33881988,33882234..33885968
Genome context
Sequence	000001 CAAAAAAGCA AGCCTGCCCC TATGGGGAAG ACTTCCTGCC CGCCTTCCCT GCAGGAGGCT GGCCCAGGGC TTTGAGGGGA 000080 000081 ATCATGGTGA ACTACAAGTG CTCCCTGCTT TCTGATGCCC CCCTAGTGGG GCCAAGGCCC TCCCTGCTCT TGGGGCCTTG 000160 000161 ACACCCCTAC TCTCCCAAGC CTGGTGATCC AGTACTGATG CTTGGTGAGC CCGCCAACAG CGCTGCTGCC CCTTCCCTTG 000240 000241 AGGACTAAGC TCCGATTTTT TATCTTGCCC AGATTCCTAT CTAAGGGGTC TGGGGAGTCA TGCCCTACCA ACCATACATT 000320 000321 CTCATCAGAC GGATTTTATC TGACCCTGTA TATCATGACT GACTTTCCAA TCTGACTGTG GCATAACAAG GAAGAAAATC 000400 000401 AAAATGTTTT ACCCCAAAAT AAATCTCCTT GCCATATCTC GAAATTGTCC TGCAAAGTCT CTTGTGGGAA AAATCCATAT 000480 000481 TCTATAGGAA ATATTTCCTT TCCCCTTTGT TTTCCTTCCT TCCTTCCCAG ATCCAGGAGA TAATCAACTA AGAGCCAGGT 000560 000561 ACCCTTTTAG GTCCGATAAG AAACATTTTA CAACCTGCTC TCTCTCTCTC TGAAGTCTGC TATCTGAGAG ATTCCTCTGC 000640 000641 ACAATAAAAC TTGGTCCCCA CAGTTCTGTA TCTTAACATG AACCTTCCTT TCCATTAATC CCAGGTCTCC AGATAAACCC 000720 000721 AACCAATTGT CAGTCAGAAA ATGTTTAAAT TTACCTATAG CCTGGAAGCC CCCACTTTGA GTTGTCTCAC CTTTCTGAAC 000800 000801 CAAACCAATG TATTTTTAAA ATGTCTTTGA TTGAGTCTCA TGCCTTCCTA AAACATATAA AACCAAGCTG TACCCCGACC 000880 000881 ACCTTGAACA CATGTTCTCA GGGTCTCCTG AGGGCTGTGT CATGGGCCAT GGTCACTCAT ATTTGGCTCA GAATAAATCT 000960 000961 CTTCAAATAT TTTACAGAGT TTGACTCTTT TAGTCAGCAC CCTTTAATCA CCAAGGCTTC CAAGCACACT CCCATTTGGG 001040 001041 AACCATGCTG TAATGGGGCC CAGACCCTGT CTTCAGGTGA TCTGAATTGG CGCTTCTGAG AAAGCAATTT GGGAGAATGA 001120 001121 TTTCCCCCCT CGAACCCAAG CCTTCCTTCT CTGGCTCCCT GGCTGAGGCC AAAGTATAGC CCAGACCTGC TTCCAGATCT 001200 001201 ATCCTCCTCC TGCAGTCGCT CCAGCCACTC CACCACTCCG CCAGGGCCAA ACTGCACTTC TTCCAGCCTG ATACCCTCTT 001280 001281 TCCTGCTGGG CTCTACCGGT CTGTCTTCTG CGGTGAGCAA CCCTCACCTA ACTGTCACAG GCCAAGGGCA TAGTTCACCA 001360 001361 CCTTGTTTTC TCTGTCAACA GCTCTTCCTT CAGACGATCA CAATGCACAT CTGTGTTTTA AACCTAAGGC CCTCTAATTT 001440 001441 TTACTCTATT TCCAACCACT AATTAAAAAT GGACTCCTCC TCTCTTCTTC CCTCTTTCTT AGTATATTCC CTTACAGTTT 001520 001521 ATCATGACGA TCTGTGAGAA TAATTGTCGT AGAGGGCTTT GGAGGGACCA TTTCTGCATG TAGATGGACT GGGGCTGTCA 001600 001601 GTGAAACCTG GATGGTTATA AGCTTTCTAT TTTAATGAAT TTATACGAGT ACAAATATAT CGCTTCAGAG CCACCTTTTG 001680 001681 TTTGCCTCAA GAAATAGCCA ATTCATGTTA CATTTTTAAA AAGGTCTTCC ACTATTAATT AAAAGGAATG ATTTGGGGTG 001760 001761 GGGTAGGGTG CGAGTGTGGC AGAGATTGGT TGTGACCACC TTCAGCTTAT TAACTTCCAC TTCCAGCAGG TTCCCAGGGG 001840 001841 GGCCACCTAT TAAAGACTGA GAGGACATTG CTTTTCCAAA CCTCCTCTCT TTTTACTGCT CGGCTCATCT CCTCAGCTTG 001920 001921 GGACCTCAGC GGGCAAGGGC AGAGTAGGAG GGAGGGCCCC GAGGGGTGGC GGACAGGCTG GTAGTCCAAG ACGGTCTGGA 002000 002001 ATGGAATAGA ATATGAAGAG AAATGCAGCC CACCCACTCC TTCGGGGAGA GGAGAGTGCT GGTGGAGAAA CTCGGGGCCT 002080 002081 GAATTTTTCT TGAGGAATCT AAGAAGATCC TTTGGCTTCA AGGCAGATGG AACCTGGATG GTTTAGGGGA GGAATGGGAC 002160 002161 TTGACAGCGG CGCTCAAAGC TTCTGGGCAG GGCTTTGATC TAATTGACAG AAGTGAAAAT AGTAGACCTT GGCTCCTCTC 002240 002241 TGCTCCCATC TCTCTCCTGC TCAAAGTCCT TGGTCAGGCA CTGTTCGTTC CTTCCAGCCC AAAGACTTGG GAAAGTAATT 002320 002321 TCTGCAGACC CCTCCAGAGC TGTTTCTGAC CCCACAGACA ATCTGGTGGG TGAAGAAACC TGAATTAGCG GAGACTTTCC 002400 002401 ACAATAGCCC TCAATCACTT CTCTTCAGCT CAGTTCCAGA CCCTTTACAA AGTGCGTGAA GGCACCATTC CCCAAAGCGC 002480 002481 AGAAAGAAGG CGCAGCCTGC CAGCAGGACA GGACATGTGA AATCAGGGAC GTCTGGGGAA ACCCTCTAAG GTGATCCTCG 002560 002561 CCCCTGGCCT AGAAGTCTAG GGAGGCGGAG GTCCCCATAC ACCCACCTCG GGGGGTACCT CAGGAACAGA GTAACCGTCC 002640 002641 CGCGGGGCCG GCTGGTGGAG TGGGGCCGTT CCTAACGGCT GCCTCCGTCC TGCCTCGCGG TCTAGGGAAG GGGTCTCGGC 002720 002721 CACCTCCTCC CGCAGCCTTC CAAATCAAGA TGGACTCGCA GGAGACTACA CCCTGCGTCT GCAGAACCTC AGAATACAGA 002800 002801 ACCACCAGGG GTTCCTGGCC CATGGCCCTG GGAGGATTGC TGTTGGGGAG ATGGGAAGGA ATCTAGGGAG GCCGAGGCCC 002880 002881 GCAACAACCA TCCCCGAGGA CCTCAGAGCA CAGTCTTCCC CCCTCGGGGT TGGCAGGGGC AGCCTGGCGC GGGGTGGGGA 002960 002961 GAGGGGCCGG GGCGGGGCCG GGGCGAGGGG GCGGGGCCGG GGCGTAGAGG GCCACCAGGT CCCTCCCCAC ACGCCCGCTG 003040 003041 TCCACGCGCT GCGGCCTTGG AGTAACTGCT GTTCTTAAAG GCTGCCTCCG TCCTGCCGCG CGGCCTTTAG AGGGTTGGAG 003120 003121 CTGGCAGAAC CGTAACTCCC TCTCTGAGGG TGAATACGGG CCTTGATTGC CAGAAGGGCC CTCGGCCGGG GACGCGGGAT 003200 003201 GATGCGGGGC CGGGAGATGC TTTCCTGGAG GCTGAGAAAC CTGGAGGGAG ACCCCCAAAA CTTCTCAGTT CGCCGACCCC 003280 003281 TTGGTCCCAG AGGGAGAGGA GCATCCCCAA AGAACATTCA AGTCTGAGCC TCAAGGAGCC TCTGCGACTC GGTGTCTAGA 003360 003361 TCCAGGAAAT GGAGAATGAG CCGTGACTTT GGATGCTTCA CTCTTGTCCA TCAGGCTCGG AATTGGCCTG TTGAAGTAGG 003440 003441 AGGCAGGACT CAACTTCAGA CCAGATTGAA GACTGGCTGA CACAGAAGAG GCACCAAAAG CACCTCTCTC TCCATAAGAC 003520 003521 ATGCCCACCA GTGCCATGAC AGTTTACCAT TGCTATGGCA ATGCCCAGAA GTTCTCACCC CTTTTCCAGA CATTTCTGCA 003600 003601 TAATCTACCC CTCAATTGGC ATGTGATCAA AAGTGGGTGT CAAAATGACT GTGGAACTGT CCCTGAGCTG CTACTCTTGA 003680 003681 CATGCTGGTT ACAGGGTAGC CCGGCTCTGC AGGGACAGTC ACGGAGCTGA AAAACTGCTG CCTAATGAAG CTGTTTTCTT 003760 003761 CTACCACCGG CTCACCCTCA AATTATTTCC TGAGCGAACT CAAGAACCTT CCTGGGCTAA GCCCCAATTT TGGGGCTCGC 003840 003841 CTGCCCCTGC ATCACAGCTT CCTCTTCTGT TCACAGCTGC AACCGCCTAC TCAACCTTCT GCGGTTCCTC TCCCTGCCCC 003920 003921 TCCACAGTGG CTGCTGATGG GAGCTCTGGC TCCCTGCGTT TTCACTATCT CCCAGTCAAA TGCAGAGTCC CTGTGCAATT 004000 004001 TAAATGCTTC TCAGCTAAGA ACAGAGAAGG GGATAGCATA AGGATATTCA AAAGATTCAA GAAATCTCAA AAGTGATCAC 004080 004081 AAAACATTTG TCTCTGACCA ACCAGAAACA TCGACGGGTG AGAAGGGCAT TTCCTCTAGC TGAATTCTTC ATGGGTCTTC 004160 004161 AGGCTCTGTT TTCACTTTGG ATTTTCTGGA GTCTCCTGAA GGTTACCTGA AATCTTGTTG GTCCTGAATA TTGTATGTGG 004240 004241 AGTCCCAAGC TGCAAGAAGT CAGTGGGGCT GGACGGGAGC CAAAATCAGA GACTCAAGCA GCACAGCTGG GCCCCATTGA 004320 004321 AAGTGAGACC AGCTGTCCCA GTTGGAAGCT GGGGTATAGA GCTGGGGATG GGTGGAGGCA GTGACAGGCT CCATGTATTG 004400 004401 GTCATTCAGA CTCCCCAGTA GCCTCAGGAC CCAACTCCCA CAGGTCAGAG AAGACCTGGT GGAGGGCCTT ATGCAAACCT 004480 004481 CAGTGGGTGA TGCAGGAGGG AGTTTTCTGA GCAGGAATGC CAACAAAAAA GGCCTTCAAA GGAAGGCCCT GCTTGGGACA 004560 004561 ATCCTGCCTC TTTATGGTCT GGTTCACAGG TTCCCCTGGG TGGGGTAATG GAATCCAAGC TAAGGTGTCT GACTTCAAAA 004640 004641 GTTTTCAGAA ATGCCACTTT TGTAAGCATC AGGGATTGGG TTTTCTGAGA TGCAAAACAT CTTTGTTAAG GGGTTAAAGC 004720 004721 ATCCTTAAGC TGTTTAGGTT TCTGGGGATA CATAGACTTA GGAAGTTAGA GCAGGTGAAG TTGAGGGGGA TGGGAACTAA 004800 004801 GAATTAGCTC AAAATAGTCA CCAATGCAGA AACCCAGGCA CTTGGGACCC TGACAGTGGG GAAGGCAGAG GAGTAACTGT 004880 004881 GGGGACTTGG GCACCCTATT AGCAGAATGG GGTAACAGAG AAGGCAAGAA TTGCTTCCCA GGAGACTGGG CTGGGAACAG 004960 004961 GAAGGGGACT AAAATGCTGT CCCTGGCTGA AGAGTGTGGA GGTATAGAGG AGCTGGTAGC AGGGCTCTGA ATCCATACAC 005040 005041 GAGAGCAAGG ACCAGTGGTT TCAGGGTGGG ATAGGGCTTT GATGTCTTCA TGGACTTAGG GTAATATTCA CCACCATGGT 005120 005121 GAATTCCACA AAGGAGAATT CACACAAAGG TCTCGGACCA GCCAGTTTCC ATGTGAAAAA GCCATCTGGG AGCAAGGGAA 005200 005201 CAAACCCAGG AATACAACTG TATTGGGGGA AATTCAGCCA GACATAGGGC AAAATTCACC CCCAATATTT CATGTAGGTT 005280 005281 CTTTTCTATT TTCCGTAAGT GTCGGCCGGT CTGAGAAATA AAGGGACAGA GCTCAAAAGA GAGAAATTTT AAAGCTGGGT 005360 005361 GTCTGGGGGA GACATCACAT GTCGGCAGGT TCCGTGATGC CCCCCGAGCC GTAAAACCAG CAAGTTTTTA TTCGTGATTT 005440 005441 TCAAAAGGGG AGGGGGAGTG TATGAATAGG GTGTGGGTCA CAGAGATCAC ATGCTTCACA AGATAATAAG ATATCACAAG 005520 005521 GCAAATGGAG GCAGGGCGAG ATCACAGGAC CACAGGACCG GGGCAAAATT AAAATTGCTA ATGAAGTTTC GGGCATGCAT 005600 005601 TTTCATTGAT AACATCTTAT CAGGAGACAG GGTCTGAGAG CAGACAACCG GTCTGACCAA AATTTATTAG GCGGGAATTT 005680 005681 CCTCGTCCTA ATAAGCCTGG GAGCGCTATG GGAGACTGGG GCTTATTTCA TCCCTACAGC TTTGACCATA AAAGACGGCC 005760 005761 GCCCCCCGAA GCGGCCATTT CGGAGGCCTA CCCTCAGGGA CACATTCTCT TTCTCAGGGA TGTTCCTTGC TGAGAAAAAA 005840 005841 AATTTAGCGA TATTTCTCCC ATTTGTTTTT GAAAGAAGAA AAATATGGCT CTGTTCTGCC TGGCTCACCG GCAGTCAGAG 005920 005921 TTTAAGGTTA TCTCTCTTGC TCCCTGAACA TTGCTGTTAT CCTGTTCTTT TTTCAAGGTG CCCAGATTTC ATATTGTTCA 006000 006001 AACACACATG CTCTACAAAC AATTTGTGCA GTTAACGCAA TCATCACAGG GTCCTGAGGC GACATACATC CTCCTCATTT 006080 006081 TACAAAGATG ATGGGATTAA GAGATTAAAG ACAGGCATAG GAAATCACAA GGGTATTGAT TGGGGAAGTG ATAAGTGTCC 006160 006161 ATGAAATCTT CACAATTTAT GTTCAGAGAT TGCAGTAAAG ACAGGCGTAA GAAATTATAA AAGTATTAAT TTGGGGAACT 006240 006241 AATAAATGTC CATGAAATCT TCACAATCCA CAATTATTCT GCCATGGCTT CAGCCGGTCC CTCCATTTGG GGTTCCTGAC 006320 006321 TTCCCGCAAC ACAAGTGGAG AGAGAGGTGG CCTGACATTA TGGCTAAGTT GATATGGAAG CATTCTGGTT TGTTCTAGAA 006400 006401 AAAATGAAAG AGGTGGTGCA GGTAATCATC AGCTCCTGGT TCTGTAGCAA GGCTTTTGCT GCAATCCCAG GAGGTAGCAA 006480 006481 CCTAGGCTTT GGTTCTGAAA GAAGAGGGTC TACCTTCCTG AATCATTTTT AGGAGTCTGC TGATGGCCAG GCTTGGTGAG 006560 006561 TTGGACTCTG TAAGGAATTT TTATTTAAGT GAGGTCTGGG TAGGAAAAGA GAAGGGAAAA ACTTGACCCT GCCTGCACCA 006640 006641 AAGGATTCTG GGAAGGAGAA TAAAGAGAAA AACCCTTCTT CATGTTTCTG CTTCAGAGCA GGAGAACCAT CACAAGCTAA 006720 006721 GTAAAGTCAA TGAAGGGCGA GTGGCCCTAT GGCCACCTGG GCACACACCT GCCCCTTGGC CACCTTGCAT AGGCAGGCTG 006800 006801 AGGAGGTCAC TAAGGCTTGG TTTTCCTGAC CTGCCCTGAT TCCACATGCT GTAAGGAGGA CCCAGAAGGC TGTGTGGCTA 006880 006881 CAGAGGTGCC CAGCATGGTG GGGGTCACTT CAGTGTGGAC ACTAGACTGG ACCGCGTGGA ACTACAACCA GCTCAGAGCG 006960 006961 CCAGCCAGAG TGCTGTTCTG GCCAGAAGGA GGAGCCAAGA CCCACACCCA GGAGGACAAT GAGCCCCTCT CTGCAGACAG 007040 007041 GAGCCAGCCA CACCTGGGGT CTGGGGAGAC TCTTCCTGAT TCCAAATGGG ACTGAACTTT AAACCAGACT GGGCATTTGA 007120 007121 GCAATTTTTT AAAAGCTGTC AACCAAATAA AGGAATGCCA

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