NONHSAT000429
Revision as of 15:02, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
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===Functio...")
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT000429 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
585 nt |
Genomic location |
chr1+:2333390..2334666 |
Exon number |
2 |
Exons |
2333390..2333781,2334474..2334666 |
Genome context |
|
Sequence |
000001 TATACTTTGT GTAGTTTTAA GAAGAATTGT GTCTTTCAAG GGAGTAAGAG AAGGATGTTT CTGTGGTTAG GGCAGTACAT 000080
000081 GTCTGTGAGC TACATGCAAA GGGTCCTGCT GCTGCTGTGC CCAGGGTAGA CCCCTCCTTT CCACAGGGAT GCTTCTGTTT 000160 000161 GCGGGGACGG TCGGTGCAGC TGCAAGGCTG GAGGCGGCCG GCAGGTGCCC GGTGCTGGCT GCAGATGCGG CGCTAACCTT 000240 000241 CTCTCCCCAC TTGAAGGCAT GCGGCTACCA AGGGCATCCT TGTGGCTATG GTCTGTACTT TCTTCGACGC TTTCAACGTC 000320 000321 CCGGTGTTCT GGCCGATTCT GGTGATGTAC TTCATCATGC TCTTCTGTAT CACGATGAAG AGGCAAATCA AGCACATGAT 000400 000401 TAAGTACCGG TACATCCCGT TCACACATGG GAAGAGAAGG TACAGAGGCA AGGAGGATGC CGGCAAGGCC TTCGCCAGCT 000480 000481 AGAAGCGGGA CTGAGGCTGC CTCACGTGTT GCAAGAACAG TTTTGAGCCA TTGTTAACAA TGCCTTTTTT CTTCACATAA 000560 000561 AGTAGTTGAT TACGAGGGAG TCAAA |
Predicted Small Protein
Name | NONHSAT000429_smProtein_287:481 |
Length | 65 |
Molecular weight | 7761.3206 |
Aromaticity | 0.203125 |
Instability index | 42.0171875 |
Isoelectric point | 10.0214233398 |
Runs | 8 |
Runs residual | 0.02359375 |
Runs probability | 0.0663531178238 |
Amino acid sequence | MVCTFFDAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTHGKRRYRGKEDAGK AFAS |
Secondary structure | LEEEEELLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHEEEEELLLLLLLLLLHHHHHH HLLL |
PRMN | LLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL LLLL |
PiMo | ooooooooooTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii iiii |