NONHSAT004695
Revision as of 15:18, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
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===Functio...")
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT004695 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
718 nt |
Genomic location |
chr1+:96457997..96488335 |
Exon number |
5 |
Exons |
96457997..96458065,96461677..96461750,96471749..96471977,96486854..96486952,96488089..96488335 |
Genome context |
|
Sequence |
000001 gaagaaaggt gatcaggaag agccatcaaa gtgttatcct ggaattcaag tgaagacagt gtttcaaAGT GGAAATGAAC 000080
000081 AGTGTCCTGT AACCCTCAGA GTGAGACTAG AGTCAGAATG CAGGCTTTTC TCATTTGAAA TCTCAAGGTA AGTCCAGGTC 000160 000161 CTTACCTCCA CCTAAAAGTT CTGCCATCAA GGAACATCTG CTCATTATCT TCTGTTCACA CATCAAATGA CTTCAATGTG 000240 000241 ATCCCTGGAT GTTCTCCAAA GAGCTGAAGG GAAATAAATA TTCTTTCTTT ATCACCAAAT ACTTCAACTG CAGAGTGATT 000320 000321 GTGCTACCAA GGCCTGAAAC TTCGGAAAAA CCTGCATAAC ACAAAATATA AAGTAAGAAG GCCCATTCTT ATCAGCAACC 000400 000401 ATATATGTAC TTCTCATCAC TCTCTCAAGA CCCTCTACTG AATCAGAAGC AAACACTAGC TACAGAGAGA TATATGCCAC 000480 000481 AGAGAGGATC CAGAGAGCCC ATCTCCGGTC AGTTATCTGT ATTTGTATGT CAACTACAGC ATCAAAAAGC ATAGGCATGG 000560 000561 ATACTAAGGA CCCCCTCTGT ACACCAACGC CAGTCCAAAG GACAGTGTGT CACTGTGAAC TGGAAATTCA TCTCTCTTCT 000640 000641 TCAATTTTTT TCTACCTACT TTATGTTTTA TCTCTAAGTT GAGGCTGTTT ATGGCCTCAT CCTCAATTAC CTTGTCCC |
Predicted Small Protein
Name | NONHSAT004695_smProtein_404:553 |
Length | 50 |
Molecular weight | 5641.3776 |
Aromaticity | 0.0816326530612 |
Instability index | 65.206122449 |
Isoelectric point | 9.10028076172 |
Runs | 7 |
Runs residual | 0.019194704909 |
Runs probability | 0.034749034749 |
Amino acid sequence | MYFSSLSQDPLLNQKQTLATERYMPQRGSREPISGQLSVFVCQLQHQKA |
Secondary structure | LEEEELLLLLLLLHHHHHHHHHHLLLLLLLLLLLLEEEEEEEEEEEELL |
PRMN | - |
PiMo | - |