NONHSAT006713
Revision as of 15:25, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
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===Functio...")
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT006713 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
625 nt |
Genomic location |
chr1-:155209426..155214397 |
Exon number |
6 |
Exons |
155209426..155209553,155209677..155209753,155210421..155210508,155210877..155210971,155213886..155214021,155214297..155214397 |
Genome context |
|
Sequence |
000001 TGCGCGGGGC CCCAGTCTCC AGTCCCGCCC AGGCGCCTTT GCAGGCTGCG GTGGGATTTC GTTTTGCCTC CGGTTGGGGC 000080
000081 TGCTGTTTCT CTTCGCCGAC Gagacggggt ttcaccatgt tggtcaggct ggtctccaat tcctgacctc gtgatccgcc 000160 000161 cgcctcggcc tgccaaacag ctgtgattat aggcgtgagc caccgcgccc ggccAACCAT CATTATTATT TTTAACGTGG 000240 000241 ATCCTCTATC CTTCAGAGAC TCTGGAACCC CTGTGGTCTT CTCTTCATCT AATGACCCTG AGGGGATGGA GTTTTCAAGT 000320 000321 CCTTCCAGAG AGGAATGTCC CAAGCCTTTG AGTAGGGTAA GCATCATGGC TGGCAGCCTC ACAGGATTGC TTCTACTTCA 000400 000401 GGCAGTGTCG TGGGCATCAG CCGCTATGAG AGTACACGCA GTGGGCGACG GATGGAGCTG AGTATGGGGC CCATCCAGGC 000480 000481 TAATCACACG GGCACAGGCC TGCTACTGAC CCTGCAGCCA GAACAGAAGT TCCAGAAAGT GAAGGGATTT GGAGGGGCCA 000560 000561 TGACAGATGC TGCTGCTCTC AACATCCTTG CCCTGTCACC CCCTGCCCAA AATTTGCTAC TTAAA |
Predicted Small Protein
Name | NONHSAT006713_smProtein_305:460 |
Length | 52 |
Molecular weight | 5418.2121 |
Aromaticity | 0.0588235294118 |
Instability index | 54.3078431373 |
Isoelectric point | 6.52130126953 |
Runs | 6 |
Runs residual | 0.0365948359542 |
Runs probability | 0.0772684449155 |
Amino acid sequence | MEFSSPSREECPKPLSRVSIMAGSLTGLLLLQAVSWASAAMRVHAVGDGWS |
Secondary structure | LLLLLLLHHHLLLLLLLEEHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToooooooooooo |