NONHSAT007033
Revision as of 15:27, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
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===Functio...")
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT007033 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1138 nt |
Genomic location |
chr1+:159931014..159948876 |
Exon number |
3 |
Exons |
159931014..159931195,159946434..159946902,159948390..159948876 |
Genome context |
|
Sequence |
000001 CTGATGTAAC AGCCTTGGGA AAGAGGTTGC AGTGAAAAGC TGGTCCTGCT GTGGTGGAGA GAATGGAGGA AAGATAATAA 000080
000081 AAGGCCAAAC CTTTGCTCCA ACTTTCTCCT TAGCTTCCCT TTGGATCTGG AAAGCTGGGG ACCCACACGG CAGAGCCATG 000160 000161 GTACTGGAGG AGCCATTAAC AAAGCTTTCA ATAAACCTCT CTTTCTTGAA GTTACCTGAG AATGGATCCA TTCCCTGCAA 000240 000241 CTGAAGATTC TAAGGAACTG GGTTTCTCAG TATACAATGG GAATGGTTGG GAGGAGGTAA AGAGTAGAAG ACAGTATCAA 000320 000321 GAATCCAGAG CCCAGCACCT GTAGTCCTAA CTATTCAGAT TCCTTGAGCC CAGGAGTTTG AGTCCAGCCT GGACAACATA 000400 000401 TTGAGACCCC CATCTCTCTA AAAAAAAAGA GAAAGAAAGA AGGAAAGAAA AAAAGAAAGA AAGAAAGAAA GAAAGAAAGA 000480 000481 AAGAAAGAAA GAAAGAAAGA GAAAGAAAGA AGGAAAGAAG GAAAGAAGGA AAGAAAGAAA GAAAGAGAAA GAAAGAAAAG 000560 000561 AAGATTGTAG CTAGGGGGAG AGTAGGTGAA AAGATGAACA ACATGACCGG GAAGATTTCC TAATCTCACC ACAGCCTGGC 000640 000641 TCTACCTTAA GTCTTTAATA AAAGCTTGAC TGAAGGTACC AAGGTGTGCT GAAGTGGAAG CAAAGTTCTC CAAAGTCCAG 000720 000721 CATGGTAGAC ATCAGTGGTG GTAACCAAGG ACAGACCCCA AGGCAAGGTG AACCTCAAAA ATGGAACCTC AAGTCTATGC 000800 000801 AGTCCAGCTG CCCTCCCCAC CAGAAAGTCC TTGTTCCAGC CCAACATCAG TGCCTCTGAG TTTGTTTACT AGAAACAAAG 000880 000881 GAAGAATTTC CTTGTAAAAA TATAGACAGA GTAGTCCCTG GCTTTCTCCT CTTGCAGGAA GGATGGATTC TCCCATTCCA 000960 000961 TACCATCTTT CCCCCACACT GGCCCCAGAA ATACTTAATT CAACTATGTG AAAATAAAGA TTGTTTTTGG TTTGAGGGCA 001040 001041 TAGGGATCCA TTTATCCTTA TTCTTTATGA GGCACTAAAT TAGCTTTGTA TGTTATTAAA TGTGTCTCGT CAATGCTGTT 001120 001121 GGCATTGTTT CATTTTAA |
Predicted Small Protein
Name | NONHSAT007033_smProtein_221:343 |
Length | 41 |
Molecular weight | 4688.0242 |
Aromaticity | 0.125 |
Instability index | 74.1425 |
Isoelectric point | 5.09027099609 |
Runs | 7 |
Runs residual | 0.00302419354839 |
Runs probability | 0.0493729023141 |
Amino acid sequence | MDPFPATEDSKELGFSVYNGNGWEEVKSRRQYQESRAQHL |
Secondary structure | LLLLLLLLLLLLLLEEEELLLLLEEEELHHHHHHHHHLLL |
PRMN | - |
PiMo | - |