NONHSAT011605

From LncRNAWiki
Revision as of 15:43, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here. ==Annotated Information== ===Transcriptomic Nomeclature=== Please input transcriptomic nomeclature information here. ===Functio...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT011605

Source

NONCODE4.0

Same with

,

Classification

sense

Length

727 nt

Genomic location

chr10-:17213555..17243427

Exon number

3

Exons

17213555..17214023,17216550..17216659,17243280..17243427

Genome context

Sequence
000001 AAACAGCTCC TGCGCGCCGC CGTGTCCACC CCTCCAGACG CTGACTCCCT TCTCCTGGCG CCGAGTCTGG CTCGAGGGGC 000080
000081 CGCACATGGC GCCTCAAAGG GCCCAGTTGG GAGTCGGGAT TCGCAAGGCA GTAAATCAAC CTCAAAGGAA AGCTGTATAC 000160
000161 CTGCACAAGT GGTGGCTGCC ATTGATGTCA ACACTGTCGC TAATGAAGTA TACAAGTATA ATTTTCCTCA CACACAGTTA 000240
000241 CTTGCCAAGA CGATTGAAtt acaTACTGTa gagtaaatga tagctaccga agacagagtg atccgtgata aatatcatta 000320
000321 atgcctctga agaggagaat gactccagtg gaacaaaaac tcttaataaa aatagataaa aatttttcta gaatgaaATT 000400
000401 TACaatataa catccatgag cccttctgga acagatgact gcatcactta atctagctga gcaagagatg aatcaaagta 000480
000481 gaaaacccag gaatgaagct gccgtgttag gaggaAAACT ATGGTTAGAA AATAGCTGAA AATGTTGTAA AGCTTTGCAG 000560
000561 TGTAGAAATA ATAATGTAAT CGGAGTGGGA AGAGGCAGTG AGACACAAAA AATATGTCTT TGCAGATAAA TGAAACTATC 000640
000641 AATTTTTTAG GACATTATTC AGTGTTGTtg tcagggtctc agcagagctg ggaaagagaa agctcagctg tcaagagcgt 000720
000721 taaagta
[back to top]

Predicted Small Protein

Name NONHSAT011605_smProtein_434:538
Length 35
Molecular weight 3787.2422
Aromaticity 0.0294117647059
Instability index 44.9823529412
Isoelectric point 6.05010986328
Runs 7
Runs residual 0.0197319434103
Runs probability 0.0408685996921
Amino acid sequence MTASLNLAEQEMNQSRKPRNEAAVLGGKLWLENS
Secondary structure LLLLHHHHHHHHHHLLLLHHHHHHHLLLEEEELL
PRMN -
PiMo -