NONHSAT012685

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT012685

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2958 nt

Genomic location

chr10-:34048641..34061608

Exon number

3

Exons

34048641..34049503,34054678..34056274,34061111..34061608

Genome context

Sequence
000001 AAAGTGGAGC CGTCTTTTCT GCACAGAGTG TGCACTATCA TCGTAACAGC AGAGACGGAG AGCAAGATGT GAGGAGGTTA 000080
000081 AAAGTCAGGG TCAGAAGTTC AGGTTGCTCT GACCCTCAAA TCAATTTCAA GCACTGTTTG TGACATTTTC CTGTGTTCCC 000160
000161 TCGCTTGATG TTAGTCTTTG CAATGAACCA CCGAATCAGA CTTCAGGGCT CATGGGACTT TGGGGTTTCA GTAGGGTCAG 000240
000241 GTCAATTTCT ACCTACCAGT GTACTGTCAC CTATGAGGCA AACCATTATC TAGGCGTTTG AGAACCTCAA AGTTTTGAAG 000320
000321 CTCTGAGGGG AAAGAGAGAG GATGAAGCGC TGGGGCCCCT GTGTCTTTGG GGCCTGACAT AGCTCAACCT GTGGCTTCAG 000400
000401 GGGGACCGTG TGCAGCCAGG TCACAGtggt accggaaagg gatcctgatc cagaccccaa gagagggttc ttggatctcg 000480
000481 tgcaagaaaa aattcaggCT GATGGCACTA AGGCTGAACC CAGAAGCTGC AGCAGTGGAC GGATGATGAT CTGAAGAAAT 000560
000561 GAGATCCCTG ATGGGCTTGG AAGTCATGGT TCCTGTAACC ATGATGTCAC ACCCTCGTCC TGACACCGAG ATGGGCTGGA 000640
000641 CACATCTGTC ACCCAGGGCA AACAAAATGC TTGGTCTGCA TCTTTCAGAA GAAAACTAAA AATCAAGTAA TTTCTTAGAA 000720
000721 GTTTGCTTGC GTGTGGCTTA AGTCTTCTTC TCCTGTTGAG GAAGGTGTTG AGTTTGACCA TGACAGCCCC ACCCAGTCCT 000800
000801 TGGCTCATCT CACCCATCAA AGAGGATCTG GAGATTCAGA GCTATGCCGT GGAAGACCTT GTCAGAGCAC CAGGCCATAC 000880
000881 TGTGCTGCAG GTGGGGTTCA GGTGCCCAGT GACAACCACC GGGGCCGCTC ATCCCTAAAC GTCTGTTGAA CTTAAAGTTC 000960
000961 TACTCAAGAC TTTCTACATT AAATACCCTT TCATACAGCA AAATCAGCCA TGTTCTGAGA TGTGAAACTG CAGCACAAAG 001040
001041 TTACTGTGGT CTCCACCTAT AGAAATGGAA TGTTACTTCA TAAAGCCCCA GGCCAAAAAA GAAACCCCAA AACTCTGAAA 001120
001121 CGACACCCTT AAATTTAACC TGAACATCTG GCCAGCCTCC TCCATCATTG AAACTTCTCC TGAGTGTTGG CATGGATCCT 001200
001201 ATGTTTCTCC AGCCAGGGAG CTTTGCTCCC CATTCTTGAT GGACCCACTG AGTCCCAATT TTCTACATTT TACTTGGGTC 001280
001281 ATTCCACCAC TTTGGGATGC TTTTCCTACT CTGTTGTACT TTAAAAATGT TTCTTCTTTC CTATTCTCAG CTTCACGCAT 001360
001361 TTGTCTTCTT TCTCAATTCA ACTTGCTTAG TTCTCGCTAC ATCAATTCCT AGAGCCATCC ATCTGCACTT Ctgaatcatt 001440
001441 taagttttgt ttggctacaa gtaatggaaa cccactctga gtaactcaag caagaactgg aatttattgg aaggacagtg 001520
001521 ggatatatca taagatcCAA AAAGAATTGA ACAAATAAAA TTTCAGAGGG AAGAAAAAGG GCAGCTCCAG TGACTTCAGC 001600
001601 AACAAGACAA CATAAGTCTT TCTAGAGCAT AGCTACTAAT ATTATTCAGC TGCAAGAGCC CCTCCCCATG AGAAACTTGA 001680
001681 TTGAAAATTC TGATTTCCCA CAGAGAAGAA TCTGATCGAC TCAGTTTAGC TTTGGTTGCC CAACTGCTCA ATCTTGCATG 001760
001761 AATTATTTCC AGCCAAGGGG ACAAGGTGTA TTATAGGGAC ACACCTGCTT TCTCCAAAGA AAAGATCTGG GCATTTCCTG 001840
001841 ATCATTTCCC TGAGAAGGAG GAATCATTGT GAGCCAAGAA GATACCTCAA GTATAATGAG CTCAGTTACA CTTTTTTGAT 001920
001921 ATCTGAGTAT TTGGTATGTA GTGTGCATTT TAAAAAACAT GTCTCTCTCC AGGACAATGT TAACCTCTTC CACGGTGGAG 002000
002001 TGGGGCTATG TGATTTTGTG CTTAATTTAC CTAGCTGGTG GGCCTCCAGT AGAGGCTGTA GTCGAGCCAG CTGATACCAC 002080
002081 ATCAGTTCTC CAAAGGAACA AAAGCTGCCC TTCCTTCCTT ATTGCAAAGT TTGACAAAAA GCAAAACGTG AAGAATAAAA 002160
002161 GCGACTTGCA TTGTCTAACA TCTACCGCAG TGTTTGAGCT GCAGCTGCTC CTCCTCCCCT GATTGTTTTC AAATATTTCT 002240
002241 TCAAAAAAGG CATTAAAGAA AAACACAAGA TATTGCACAG GGAACCAAAA CAAATCACAA TCTTCAAGGA CAAAGCATTG 002320
002321 CAAAATGGCT TACATCCCCA AATGGGAACA GATATGGTTG GAAATTAAAA CAATCTTTTT TATTTTAAGC GGAAATGCTA 002400
002401 GCAGATGCCA CAAGAAACAT ATGGAACTCG CCACAGACAA ATAGGGAATG CTTTCTGCGT GTGGAAGTAG AGCAAAGGGA 002480
002481 GTGACCACCT CTGACTGTCA GGGGGAACCA TCAGCTCGAA CTGTTTGCTA TGGCAGGAGG GAGTTTGCAG AGTCCGGAGT 002560
002561 CCTGCCCTCA TGAAAAAGCT TTAACGGTCT TGACTGAGTA ATTTAAGTCA TTCTTGTCAG GGAGTTTCAG AACACTATGC 002640
002641 ACAATTATAT TTATTTCACA ATGCATTGAT TCCAGATATC TTTTTAAATG TGCTTACCTC TGTGTGCGTT GTTACCTGTT 002720
002721 CCCTCTTTGA ATCTCTGAAT GAAACAAAAT AAATAGGAAA AAATGGAGAC ATAGAAGCAT TGTCCACAAG GCATCTCCCA 002800
002801 CTCTAGAGGT CTCCCAGCCC CGTGCTAGCT TGTTAATTTA TTATCGCTTG TCTGTCAAAC AAGGAAGATA TAATTTGCCA 002880
002881 CACAACATGT TTTCCTAAAG CAATGTTTTT GTACAATTTC CTGATTTCCA AAAATATGAC CAATGATATT CTGGTTGA
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Predicted Small Protein

Name NONHSAT012685_smProtein_1958:2221
Length 88
Molecular weight 9571.1414
Aromaticity 0.0689655172414
Instability index 57.2528735632
Isoelectric point 7.70623779297
Runs 11
Runs residual 0.0118226600985
Runs probability 0.0470764882531
Amino acid sequence MSLSRTMLTSSTVEWGYVILCLIYLAGGPPVEAVVEPADTTSVLQRNKSCPSFLIAKFDK
KQNVKNKSDLHCLTSTAVFELQLLLLP
Secondary structure LLLEEEEELLLEEEEEEEEEEEEEELLLLLEEEEEELLLLLLLLLLLLLLLLEEEEEELL
LLLLLLLLLLLLLLHHHHHHHHHHHLL
PRMN -
PiMo -