NONHSAT013065
Revision as of 15:46, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
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===Functio...")
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT013065 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
744 nt |
Genomic location |
chr10-:45556875..45567068 |
Exon number |
5 |
Exons |
45556875..45557088,45557710..45558032,45560975..45561061,45561623..45561669,45566996..45567068 |
Genome context |
|
Sequence |
000001 GGGGGCGCTG TGCCTCGCCC GGAGCCTCAC CCAGAGCCTT CTGGGGTGGT GGATAGGTGA GGACCTCATC GAGGTTTGAG 000080
000081 ACTTAAATAC CTCTCTACTA AAAGGGAAAT GGATAAAAAG ATGCTGACTG CCAGGCTGGT TTCGGATCCT TTGTATTCTG 000160 000161 TCAGATGAGA ACACTTGTTT ACCTTCCAGG ACTGACCTGA GCATGAGTTT CTAAgaggca acatcgtctc atgaaagcag 000240 000241 gcctagacca gaagtaggaa aatctctcct cattcaaagg tcagcttgcc atttgccagc catgctatcc tcagcagctt 000320 000321 ctccttctgc aaagttggga taacaaaaaa gtttccctcc ttgccaacct cctctggtga ctgggataag cacacaagat 000400 000401 gatgtacatc aagacacAAC ACTCCCAGCA AACAATGGCA TCCCAGCGGA CTCTTGTGGA CTGCCTGCCA CGTGATGGCT 000480 000481 TTAGCTTCAA TTCTACTGCC GATTCTGCTA AAGCGAGGGA GGAGTCGCAG ACACTATTGA AATGAGGCTT TTAAggccag 000560 000561 gtgcggtggc tcatgcctgt aatcccagca ctttgggagg ccgaggctgg tggatcatga gatcaggaga tcgagaccat 000640 000641 cttggctaac atggtgaaac cccgtctcta ctaaaaacat acaaaaaaaa attcgccatg catggtggcg ggcgcctgta 000720 000721 gtcccagcta ctcgggaggc tgag |
Predicted Small Protein
Name | NONHSAT013065_smProtein_398:544 |
Length | 49 |
Molecular weight | 5452.0995 |
Aromaticity | 0.0625 |
Instability index | 44.0083333333 |
Isoelectric point | 7.94000244141 |
Runs | 9 |
Runs residual | 0.0219298245614 |
Runs probability | 0.02114859958 |
Amino acid sequence | MMYIKTQHSQQTMASQRTLVDCLPRDGFSFNSTADSAKAREESQTLLK |
Secondary structure | LEEEELLLLHHHHHHHHHHHHHLLLLLLEELLHHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |