NONHSAT015994
Revision as of 15:54, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
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===Functio...")
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT015994 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS),sense |
Length |
714 nt |
Genomic location |
chr10+:102743969..102745628 |
Exon number |
3 |
Exons |
102743969..102744114,102744247..102744560,102745375..102745628 |
Genome context |
|
Sequence |
000001 CCTCCCTTCA TTACCCCCAC TCCATACCCT TCTCCCAACT TTTTGATGTC CCTGTAGGGC TGGCCAGTCA GGCCCAGCCA 000080
000081 AAGCCCCCTC CTCAGTCTCC ACAGACCCAC ATGTGAGCAG CCCAGGCCCA TCGGTGCTCC TCAGAGGCAG GGCTCTGCAG 000160 000161 GTCCATATGG GCTCAATGTC ACCACCCTCT GCATGGCCCT GTGTGCTGGA TGGTCCTGAA ACCAGACAAG ACCTCTGCCA 000240 000241 GCCACCTAAG CCCTGCGTAC ATTCACATGC ACACATGGAA GAATGTTTAT CGGCTGGGCT GCAGTGCCCC CACCCTCACC 000320 000321 TTCTCCTGGT GCATTCTTGT TTCATCCCTG CTTCTGGACT TGGGGTACCC TCCCAATTGC CACATCCTAT CTGGTCCTCT 000400 000401 TCCCCAGCCC CATGTGGTGA CCTCTTTGTC AAGAGCTTGG GAACGGGCCA GCCTGGGGAG CTATGACTAG TCTGCTTCAT 000480 000481 CTAGATGCGC CCACCCCTGA TCACCAGGGG ACAGGCTCCT GAGCCTATAC AGAAGGTGAT ATCTGCCTCC AGGATTGGCT 000560 000561 CTGCTCCCCA ATACAACTAT TTGCAGAGGA AATTGGGATC CTCCGCTTCC ATCCTGACTC CTTGGCAGGC ACACAGGCCT 000640 000641 CTTTAGTAAG GTTCACACTA TTCATTGATC ATGGTGTTAG GGCATGACAA GAAAATGACA ACAGTTCAAG AATT |
Predicted Small Protein
Name | NONHSAT015994_smProtein_209:469 |
Length | 87 |
Molecular weight | 9534.9534 |
Aromaticity | 0.093023255814 |
Instability index | 48.5023255814 |
Isoelectric point | 8.55731201172 |
Runs | 12 |
Runs residual | 8.67754251998e-05 |
Runs probability | 0.0418138726962 |
Amino acid sequence | MVLKPDKTSASHLSPAYIHMHTWKNVYRLGCSAPTLTFSWCILVSSLLLDLGYPPNCHIL SGPLPQPHVVTSLSRAWERASLGSYD |
Secondary structure | LLLLLLLLLLLLLLLHHHHHHHHHHHHHHLLLLLLLLEEEHHHHHHHHHHLLLLLLLEEE LLLLLLLLEELLHHHHHHHHHHLLLL |
PRMN | - |
PiMo | - |