NONHSAT024720
Revision as of 16:21, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...")
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT024720 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1407 nt |
Genomic location |
chr11-:120099586..120101127 |
Exon number |
2 |
Exons |
120099586..120099602,120099738..120101127 |
Genome context |
|
Sequence |
000001 CTTTTTTCAC TAATAGTAAT GATACTAAGA ATGGCTAACA GCACTAtgtg ctagatgctt gacatgcaag aattcacttc 000080
000081 ggtctcttaa gtaagctcat tttatagcta agggagtgga ggcacagaga ggtcaagcaa cttgacccat ggctgcacag 000160 000161 caggtaagta gccgagccca gatctgaagc ggggttccaa tctccacccc atctcttgcc ttcgcgctgg ctatttctGA 000240 000241 CTGGCTTACT ACGGTTGCAG CTATGTCTGT CTCATTGTCT TGGGTGCAGA AGTTTTATCT CATCCTTCCC TAGTAACATC 000320 000321 TTCCTTCTCC TCCTTCCTTC CTCAAATGGC TGAGCACACA GTAGGTGCTT TCGAAGTTCT TGTTCCAAGA TAGGCCACTG 000400 000401 CTAGGGTGTG GGGACACTTT CTGACATCAG GTGGCAGCAT TGGCCAAAAG TTTTCTCCAA ACTCTGGGTC TCATTAGTCA 000480 000481 AGTAAAAACT TAAAACGTTT ATTTCTGGTA GAAATGATAA ATACTTTGCA CTAAAAATCT GGAATTCAAG TTTTCCTCGT 000560 000561 ACTTCATGCT CCCTCCCTGC CCCAGAACCT TACAAAAATA TTTCTGTGTA GAGAGGGAAA GAGCTGGTGC CTGCTCTGGA 000640 000641 GGCAACGTCC AGGTCCGGGA AAGGCACTCG TGGTCTGTGA TCTGTCTCAG TGATGGGAGG TCTCCACTCG CCCCACAGGC 000720 000721 AGCCTCGGGG CCAGAGATGA GAATATGCTG TAATCCAGTA CAGGGGCTGC GTCGTGGGTC CCCAACAGCT CCTTCTTTGG 000800 000801 GGATAGTGAG CCCCTTGTTG GGGAGTAGGA AGGGACTGAG GGGCCAGCTC CTTCCAGATG TGTGCATGGG GAAGGGAGTT 000880 000881 GTGTCTGGGG AGGTGGGTGT CCAGGTATAG ACTCCTTTTA GGGTCTAAAC GTTCAAGGAG TTCAACAGAA CAACCAGAGG 000960 000961 CCATCATGTT TTGGCAGCTT GCAAGTGAAC ACTCCAGGGG AGATGCAGGA GGGAGGGGTG TAGATCTGGG GAGCCCTTCT 001040 001041 CTCCCTCTCT GCCCGCAAGG AAGGCACAGG GTGGGAATGG GGGTGCCTTC ATGAGACCCC CTGCCATGCC ACACCCCCTT 001120 001121 CACAGTCATG TGAGATGGGG CCAGAGGGGC CCAGGCTCTA GGGCCAGGGG AGTGGGGAGG GAGGGAAATA AGGCCTCAGG 001200 001201 TGGGGGTTGC CACCCCCTCT AGTGGCTGGT GAAGAGCAGT GGGCCCAGAG CAGCCACCCG CCAGGTTGCT CCCACCCTAG 001280 001281 CCTGGGTAGG GATCCTCATC CCAGAGACAC AGCTGCCTCT GGGGCACGTA GAAGTCGAAG CTGTAGCTCT TCTGGCAGCT 001360 001361 GCGGATGCCA CACTTGTAGG GCGTGGGCCG AGCCTCGAAC ACAGAAC |
Predicted Small Protein
Name | NONHSAT024720_smProtein_857:1093 |
Length | 79 |
Molecular weight | 8582.7638 |
Aromaticity | 0.0641025641026 |
Instability index | 69.9012820513 |
Isoelectric point | 10.0908813477 |
Runs | 13 |
Runs residual | 0.0329893683552 |
Runs probability | 0.0427282486106 |
Amino acid sequence | MCAWGRELCLGRWVSRYRLLLGSKRSRSSTEQPEAIMFWQLASEHSRGDAGGRGVDLGSP SLPLCPQGRHRVGMGVPS |
Secondary structure | LLLLLEEEELLLEEELEEELLLLLLLLLLLLLHHHHHHHHHHHHLLLLLLLLLEEELLLL LLLLLLLLLEEELLLLLL |
PRMN | - |
PiMo | - |