NONHSAT025268
Revision as of 16:23, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
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===Functio...")
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT025268 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1129 nt |
Genomic location |
chr11+:134339400..134375553 |
Exon number |
4 |
Exons |
134339400..134339495,134350739..134350805,134352521..134352624,134374692..134375553 |
Genome context |
|
Sequence |
000001 aagcgtaggt gaTGAGCTtg aatcaggtaa gaattatatt ctacttccag ctaaagaaga ggatatagaa gatcaatagc 000080
000081 ttaaacaaaa cagaagGGCA TGGACTGGAA CTCCCAATAC CCCTGACATG GGCTGAGTCA ACGTGGTCAT GAACATGTGA 000160 000161 CAGGAGGCAG CAGAAGTTGC AGAGAAGAGT GAGGCACGTT TGAAAAAGGC TGAAAAATGT TTCTGTCCAG GCAAGGGTGT 000240 000241 GTGCTGAATG ACTCAAGGAT TTTTTGGGCA ACACAAACCA ACACGAGCCG TGTGAGGATC AGGTGACAGC TGCCCAAAAG 000320 000321 CTGACACAAG GAACAAGCCT GGAGGAGTGA GGATGGGTGC TGTGAAGGAG GTTGTGCAGC TGGGCCCGCA GTCGGACCTG 000400 000401 GTGAGATCAG AGGAGGGGGT GCCACCAGTC TGTGGACGAA GATGAGAAGC TGGAATAGAG CAGAAAACAG GAGGCTGCCA 000480 000481 CTCTCCATCT TTCCCAAAGT CACTCCAGGA GCAAGGGTGT CATTTACTGA AATGACAGAC TCTCCATTTC ACATTTTTCC 000560 000561 CCCAAGTGCA GAGTGCAGGG AAGCAGATGG GCTAAAtttt tagagtcagg gttattaatg tatactttac atagtaaact 000640 000641 ttcccctttt aagtgtgcag gcctgaggtt tgccaaatat gtgtaggcat ttaatcacca ccacgatcaa gatgtagaat 000720 000721 attcccacta tcaaaaagtt tgctgtgtcc cttgatggtc atgccccatt ccacagcccc agccccagcc cctggagatt 000800 000801 gctgtctgct ttatgttcca gtggttttat cttttccaga ctgtatggat gtgaatggaa tcagatgtga ttccaaggtg 000880 000881 ttttatcttt tccagatgtg aatggaatca gatgtacgaa atcctatggt agggggtctt ctgagtctag ctccttttgt 000960 000961 ttagcgtgat gcatttgaaa ttaatccatg tctcaggcat caggagttca tttctttttc tgctgagtag tatttcattg 001040 001041 tatggatgta ctgcaatttg cctatccatt cacctgttga tgtacatttg agatttttgg caattatgaa taaagctgct 001120 001121 ataaacaga |
Predicted Small Protein
Name | NONHSAT025268_smProtein_968:1090 |
Length | 41 |
Molecular weight | 4495.4835 |
Aromaticity | 0.1 |
Instability index | 61.25 |
Isoelectric point | 8.84368896484 |
Runs | 6 |
Runs residual | 0.0280241935484 |
Runs probability | 0.00288523817935 |
Amino acid sequence | MHLKLIHVSGIRSSFLFLLSSISLYGCTAICLSIHLLMYI |
Secondary structure | LLEEEHHHHLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHL |
PRMN | LLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHLLLL |
PiMo | iiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTToooo |