NONHSAT037497
Revision as of 17:02, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
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===Functio...")
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT037497 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1130 nt |
Genomic location |
chr14-:69334574..69336668 |
Exon number |
4 |
Exons |
69334574..69335064,69335372..69335668,69335961..69336080,69336447..69336668 |
Genome context |
|
Sequence |
000001 ATGACTACTC TTAAAAGTTG AGAAACCAAA GTCGCCCTTA CTTCATCCCC AAACTGAGGA GCCACCTAAA TCTGTTGAAG 000080
000081 TTCCCTCTGG GGTCCAATCC AGAAGCCATC ATAGCCTTCA GGGTCCATGG AAGAAAGCAG TTCCATTACA GAGAGCCCAG 000160 000161 GAGTTCAGCC AGGGAAAATG CTCACTGAAA AGCAGTAGAA GTGGAAGCTG TAAGAATATT AGAATAACAC ATGATAGCTC 000240 000241 CAACAAAATT ATGATGTCTC TGGGACATCA TAAAGGAGAA TTCCTTAGTC AGAGGGAGTT TACAGAACCT AATAAGGAAC 000320 000321 TCTCAGAGTA AAGAATGTAT TGaaaaGCTC AAGAATTATG AAAGAAGGTT ACTACAGGAC AAAGAAGGTC TTTGAAACCA 000400 000401 GCTCTGTATA CAGAAGGAGG TAAATCATGA GATTAAAAAG TTGCTGATGG CTTCTGTTGG GGATGATCTT CAGTATCACT 000480 000481 TTGAATGTCT AGTCCTTGAG AAAAATCAGC TTATTTTAGA AAATGAAGCC CTAGGTTGAA ATACAGCTCA GCTTTCCAAA 000560 000561 CAGAACGTAT GTCAATACAG TGTGATACAT GGCAAAGTAA ATTCCTTGCA AGCAGGGTAA TGGCAGATGA GTTAACCAAc 000640 000641 GTCAAAAACG TGATGCACGT GGGGCCATAC AGGATCTCCT AAGTGAATGG GAACAGTTTC TTCAGGAAAT GATAGCTACC 000720 000721 CAGAAATTAT TGGAGGAGCT CTTAGTCTCC TTGCAGTGGG GAAGAGGGCA ACTTTACTCC CCTAATGTAC AACCCCACAG 000800 000801 CACAGCAGAG CTGGCATTAA CAAATCACAA GTTGGCAAAA GCAGCAAATT CTCATCTTCT GCGAAACGTT GGCATTAACT 000880 000881 ATCAAAAAAA GATTCCATCG ACAGTTGAAT TCTGCAGCAC CCCAGCTGAG AAAATGGCTG AAATGGTTCT ATAAACTTTA 000960 000961 GATCCAACTA CCTATACAGA GAGCTCACCT GATAATCCAT GTTTTGAGTT TTCACCAACC ACCTTACTTG CTGCAAAGAA 001040 001041 AAATTCTGGA TGATTTCATC CCTAGGCTAG ATATGAAAAT ATAACTTTCA ATTTCTGCAG TCACTGCCAG GGAGAACTTA 001120 001121 CTGCCCTTTA |
Predicted Small Protein
Name | NONHSAT037497_smProtein_686:784 |
Length | 33 |
Molecular weight | 3188.6493 |
Aromaticity | 0.03125 |
Instability index | 43.828125 |
Isoelectric point | 5.82305908203 |
Runs | 7 |
Runs residual | 0.0271045918367 |
Runs probability | 0.0209200797436 |
Amino acid sequence | MGTVSSGNDSYPEIIGGALSLLAVGKRATLLP |
Secondary structure | LLEELLLLLLHHHHHHHHHHHHHLLLLEELLL |
PRMN | - |
PiMo | - |