NONHSAT037759
Revision as of 17:03, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
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===Functio...")
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT037759 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense,sense |
Length |
933 nt |
Genomic location |
chr14+:74417013..74422663 |
Exon number |
3 |
Exons |
74417013..74417300,74420138..74420272,74422154..74422663 |
Genome context |
|
Sequence |
000001 GTGCGACGGC GCAGGTCTGC ACCATGGCGG CCCGGCTTGT CAGCCGATGC GGGGCTGTGC GTGCAGCTCC CCACAGCGGC 000080
000081 CCGCTGGTGT CCTGGCGCAG GTGGTCCGGC GCCTCAACAG ACACCGTGTA TGACGTGGTG GTGTCGGGTG GAGGCCTGGT 000160 000161 GGGCGCTGCC ATGGCCTGTG CCTTGGGTAA GCCCTTCTCC AGGCTACTAG TGGCCGGAAA CCGGGCCGCG GAGGCACGAT 000240 000241 GAGAGCCGTG AGAGCCCTAG CACGACTTGC CCAAAGACAA TTTCTCAGGA TATGATATTC ACTTTCATGA CAAGAAAATC 000320 000321 CTGTTGCTCG AAGCAGGTCC AAAGAAAGTA CTGGAGAAAT TGTCAGAAAC TTACAGCAAC AGGGTCAGCT CCATTTCCCC 000400 000401 TGGCTCTGCA ACGCTTCTCA GTAGTTTTGG TGCCTGGGAC CATATCTGCA ACATGAGATA CAGAGCCTTT CGGCGAATGC 000480 000481 AGGTGCCCCT TTATCTTTTC AATTTTGTCA AGATGTCTTG GTCTGTCTTA AGATATCGGA GTCCACTTTC TCCAAGTGTT 000560 000561 CTGTGAATGT AGGAGGAATC AGACAAGGTT CACATTCAGT CCGAGGAAGT GGGGAGAAGC ATTCCCAGGA GAATTTTCTT 000640 000641 CTCATTTTAT ATTTTCCTAC CAGAGAGGCT GACAAATTGT GATTTTCTGC TCTGTCACTT GGGAAAGCAA TATTGTTTCT 000720 000721 GATTGGAGTG ATGTTTCCCT CTTGGTTTTA ATGCAGACTT TCCTTTTGTG TTTCCAGGTG TGGGACGCCT GCTCAGAGGC 000800 000801 CCTGATAATG TTTGATAAGG ATAATTTAGA TGACATGGGC TATATCGTGG AGAATGATGT CATCATGCAT GCTCTCACTA 000880 000881 AGCAGTTGGA GGCTGTGTCT GGTGAGGCCC CCATCTTCCA CCTTGCATTC ATT |
Predicted Small Protein
Name | NONHSAT037759_smProtein_23:241 |
Length | 73 |
Molecular weight | 7340.4199 |
Aromaticity | 0.0555555555556 |
Instability index | 41.4625 |
Isoelectric point | 11.2147827148 |
Runs | 16 |
Runs residual | 0.0813057583131 |
Runs probability | 0.0528230436318 |
Amino acid sequence | MAARLVSRCGAVRAAPHSGPLVSWRRWSGASTDTVYDVVVSGGGLVGAAMACALGKPFSR LLVAGNRAAEAR |
Secondary structure | LHHHEELLLLEEELLLLLLLEEEEEELLLLLLLEEEEEEELLLHHHHHHHHHHLLLLLLL EEEELLHHHLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLL LLLLLLLLLLLL |
PiMo | oooooooooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiii iiiiiiiiiiii |