NONHSAT040983
Revision as of 17:10, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
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===Functio...")
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT040983 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
7203 nt |
Genomic location |
chr15+:25243337..25271759 |
Exon number |
8 |
Exons |
25243337..25243633,25244117..25244225,25245392..25245521,25246505..25246820,25247872..25248035,25264174..25264295,25264975..25265016,25265737..25271759 |
Genome context |
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Sequence |
000001 GGAGAATAGA ACGACTACTT CTACTTTCTG TATCTGAAAT TTTCAAAAGC TATTTCAAAA TGAACATTTA AACAACAGGA 000080
000081 AATTTTAGAG ACAACCACTT TGTGCCTGTC TTCATCCTTG ACATTCAACA TCCTAGGAAC AATGGGCTGT TGTATTCAAC 000160 000161 TTCTTATTCC CAACAGCCAT TATGAATGGT TTTTGATTGA TCTCACAAAG AGCATGTGCT TTAGACATTA ATGCAGCGAC 000240 000241 TACCATGAAA CAGAGTATTG GATTACCTAA GGAAAGAAGC AGAGGATGGA ATTTGAGGCA ATCAGGATGA GTGAAAAATT 000320 000321 GATTTGCAGC TGACCTGCAA ATGGAATCAT CAGGAACATC CCTTTCTCAT GGAGTCCCTT AATTTACAAG TTAACTGCAA 000400 000401 ACATAGGAGA TGATAGTTCC AAGAAGGAAC ATTTTATCGT CTTTGTTTTT AATCTCAAGA ATGGTACCTA CCATCAGTGA 000480 000481 ATGACCTGTT GCAGTGCTTT CATTGAAGTG TTCTTCGTTC CCTCAGCAAT ATGATTGTGA TGACTGAAAA AGGGAAACTG 000560 000561 TGCCACTATT TGTACCATCA TTTTCACCAA AATCTAAAAA TGCTTTTTAT GACGTATGGA GACATTCTTC ATGTTTGTTT 000640 000641 CAGTGGACAC TCCTTGCAGA TGTAAAAAAC TGAGAAAACT CACTTTTGGA AAGTGACCTA AAGAGTGTCA TTGAAGTGAA 000720 000721 TTTTAAGTAG GCACGATGAT TGTTTTCATG GTTGCTGTTG GATCATATCT CAGGAGCTGG AATGACAGAC ATTATTGAAC 000800 000801 AAAGAAATCA GGATAGTGGA ACTTAAAGGG CTTCATCTCA GTGCTTTCAT AAAATATTCC CTCTGTATAC TTGCATTTTT 000880 000881 TTCTATCAAT TGACGCTTAC AATTATTTTT GCAAGTTGGA AAAAAATGCA GTATTAATTT CATttgcaac aaatttaata 000960 000961 gattaattag gagagaatag atatctttaa aattgagtct tctgtccaac tgcaagTTAT AGCTGAGGTG GTACCAGTTT 001040 001041 AAGAAGTGAG AACTTCTTCA CTGACTGAAA TTTGCATATC AATCCAAATC ATTGTGCTTA TTTACTATTT TTGTAGACGT 001120 001121 CATTCTTCAA AAGTGCTGCA TCTTCAATAG TCAAGGAGGA CAAAGACATC TTTCCTGCAG GTGGTGACCA TGTGGATAAT 001200 001201 AGGATCATAG ACAAATGGTG GTTCCATCTA CAGCATCACC GAAATGCTGT TGTTACTGCT TCTTTCTGGG ATCTTCTTGC 001280 001281 ATCTTTGCTT CTAAAGGGGC ACACCTTTTA TAGAAGTACG TCCAGGAATA GAAGTGACCT GCTTTTTCGC AAGTAATTGC 001360 001361 CTGGAATGTT TTTATGTACT TCTCTGCACT CTCAATACAT TTCATGCTTC CCTCTATTTT TGTATATTAA CTCATTGTAT 001440 001441 TTCTTAAATT TATATTTTAC TTTATGAATG GAAGTGAGAT TTGTGTATGG TAAATATAAT TAATTCAACC CCATGGATAC 001520 001521 GTTAGTCACT GTCCAGATGA TGGCAAGTCT TTCTCAGAAG CAGAGGGCCT TGGTGTGCCA GTGATTTTTT TTCCCCATGT 001600 001601 GTAAGATACT TTTTTTCCTC ATTTGAATCA GGAGCCCACA GTTTTTAGAC AAGTCCCAAA TGAAATCTTA AGCATTTGTG 001680 001681 TTATCTGGAC TAGACCTTCT GTAGTATCCT TTTTGTTAGA CCTAGTATAT CTCATTGCAG ATCAGGATCT GAGATTGACT 001760 001761 ATAGTTCACC TCTTTCCAAG TACACAAACT TGGATGACAT GACAACTGAG TGTGTAAGGG AGAGCGAGAC CCTTGCACTG 001840 001841 CCATTTGAGC CCTTGTGATC TCATCTTGTA GAACATGTTG TACAATCATT TTATTGGTAT CATTAGTGTT ATTTGGGGCT 001920 001921 GGAATAAAAA TCTCAGTGCA CCAAAGAGAT TTCCCCTTTA TCCACGTTAC CCTGGTTTTC CTTTGTTTTC TGTTTAACCT 002000 002001 AAACGGGCTT AATATAAAAT AGTGCTTATT TGGTGTTTTA ATTGTCTGCT TCTATAACAT AAGCTGCACT GTCCATTGGG 002080 002081 GAACTGCTCA CCATATTGCC CAACCTGTCT TGATAGGTTT ATACATGGGA GGCATTCAGT AATATTAATT ACCTCTCTAG 002160 002161 ACCAGTGTTA GCAATAACAA ACACTTGCTA GAATTTTAAG ACTATATAAT CAATCACTTT GATGTCAGTT AATCCTACCA 002240 002241 ACACAAGATT AAAGGTTTAA AAATCTCATA CGTGTACAGC CATTAGTGTC TCCTTTCATA CTATATTATT TTGTTCATTG 002320 002321 GCAGCTAGAT TTTTAGGTAG AACTTGTGTT CCTTTTTGCA ATGCTCATTT ATTTTACCTG GACAGAAGGT GCTCTTCTGT 002400 002401 CTCTTCTCCA AAGTTAATTT ATCTCATACT ATTTCTTGTG TTAATATTTT CCAAGTTCAG TATGCTGTTC TGGTTATAAG 002480 002481 AAGATCAGTG TCCTAATCAC ACACTTTTAC ATTATATGAA ACATCATACA GAGTTTTGTA GTCTGTATAA CAATACACAG 002560 002561 AGGTAGCAAA ATTTGTAAAA GAgcagacta tatagtccat actgtagtaa ctactcaaca ttgccattat acgtgaaatc 002640 002641 ggctataacc aattcataaa caaatgaatt tggccgtgtt ctagtaaaac ttatttacaa aaacatgtgt taggccagat 002720 002721 ttggaccaca ggctgtagat ttctgacctc tgGCTTACAG CAGAAGTTTA TTATGATCCT GGGGAAGGTG GATATACATG 002800 002801 GAAGGCAGAA GCGAGAAGAT GTATTCCATC CCATGTCATT TTTCTGAACC CTCAACGTAG GAAGTTAAAC TAAAACATGG 002880 002881 GGCAGAATCT GCTTTAAGCC TTTGAATTCT TGGCTCTTAA AGCCAGGTTG AGGGTTATGT GTTTTTATTC TTTTATATCT 002960 002961 CCTTTTCACT TAGGCTTGGC AACTAGTTCA TTGAAACAGA GCCAACAAGA ATGAGTGAGT CACTCAGTGA TATGAAGCAA 003040 003041 GCTGTGGTCA TTTATCTACT ACCTTCCATA CCTACTTCCT AGGTTTGATA AGTAGTGTTT GTAGTGTAGT TGTCAGTAAC 003120 003121 TTTTCTCAGC TTACATAAGT TTATGTGGAA TTCATTTACA AATGTGTGAT TATTACGATA GATGTTATTT TATAAATTTC 003200 003201 AAGGTTCTTT AATACAGCAT GGACATGTTT CTAAATCAAT AAATATAGCT TACCCACAGA CTTTTTATGG GATGTAAAGT 003280 003281 ATGTATTACA ACAGGTAAAT CCATTTCTCT GTTTTGGGAA AGCAGGTTAA TGTTTTGTTT GTTTTGTTGC TGCATATAAT 003360 003361 GTTGCACTAT ATATATATTC TAATGCAGTT GGTCTCCTAA Ttctacagga taaatgtcta gctgtggcat tgttggatca 003440 003441 tcagtttcgt ttcagttaga tgctgtgaaa ttgctcttga aaatggtgtc ctctgccacc acagaacggt gttgtaatgg 003520 003521 aagtgccaat tttcataaaa acttgtgtgc aacaggtatt aagaattttt gaggtcgggc gcagtagctc acgcctgtaa 003600 003601 tcccagcact ttgggaggcc taggcaggtg gatcacctga ggtcaggagt tccagaccag cctgaccaac atggtgaaat 003680 003681 cccatctcca ctaaatacaa aaaattagct gggcgtggtg gcatatacct gtaatcccag ctacttggga ggctaagaca 003760 003761 ggagaattgc ttgaacccag gaggcggagg ttgcagtgag ccgagattgc accactacac tccagcctgg gtgatgagcg 003840 003841 aaactccatc tcaaaaaaaa aaaaaagctt taaattttta gccaatctaa taggtgaaaa tggcatttTT AACATAAGTC 003920 003921 TGACTTAAAC AATTAATGGC CGTGGCTAAA AGAAGAATCA AATAATGATG TGTGATTTAT AAGATAAGGA GGCAGTACCC 004000 004001 CATTTTTCCT CACTCTACCC AAAAATCCTG TTTATCTGAG CAAGAAATCA TTAATATTTT CTAAATCCGC TTGGAAGTTC 004080 004081 ATAAACGCCC TAAGTATACC TTATACCAGC GTttttatga ctttgtattt ttgaaataat tttagattca gaatcgcaag 004160 004161 aatcatgcag agcgacctga tttacgcttc acctagattg actttttatt ctgcatcgtt gtgttcttcc cccacttcct 004240 004241 cttcttgctc tcgcctccct ttatatgttt atacatagca ttatcatttt atgtactatt tgaatgattt gccgacatta 004320 004321 tcttcctgta acccaaaaca cttcaacatc tactttctaa gagcctgagc atcttatatt gacttcggta aaaatttcaa 004400 004401 aataatgaaa tgtgtcaata gtataaaagt ataacagtat gcagtccata ttcacatttt acccattttt ccagaggtgt 004480 004481 tctttatagc agtttcttcc cttctacaac atccagaaaa ggatcttcta ttgcattcaa ttatcatgtc tctttagttt 004560 004561 tgtttaatct gaaacagttt cctggacttt gatcacatca gtgttcttaa aaagtaatag ctaacagatt taaggagata 004640 004641 cctcagattt tgaattttgt gtttcctcat gaaaaggttt aagatactca ttttgagcag aaataattca gtattctcag 004720 004721 tcttccttag tgaatcatct caggtgacaa ataatgtcac tttgtctcac tttgaattac tttgatctct tggttcgatt 004800 004801 ggtgtccact ggacttttcc actatagtta acattccttc ataattaatt tggaactata caggtattct atttttcatc 004880 004881 aaacttccac atagtaggtt taatatgcac aggtgacttt tacctgaatc agtgttgatt agaaaaaaat ctgttattgc 004960 004961 ttagatgcat tatttagtat cttgtactgt aaggaagagt ttGTATATCA TGGCCTGTCA GAACAGTCCC GCAATGTGTT 005040 005041 TTATGAACTG AAAATTCTGA AAGAATAAGG TAGTGATTTA TATGAGAATA CAGGGAAAGG GTTACCCAAA GAGTCTAATG 005120 005121 AATTTATGTC TAAACCATAG AGTGGAATGT GAGAGACACA CAGAACTCCA GAGTTGTGAT GCAAATACAC TGCACAGTGG 005200 005201 AAGGAGAAGA GGAAGTTTTT GGTAATAGTG TTTCATCTAA TGTAGCTCTG TAATGTATGT GTGCCTTCAT TATTGGAAGA 005280 005281 GTGTTCAACA GTTCACAGTT GAATAGACTG AAGCATGATG CTGGAATCTG GGTTCAGATT CTAGATCCGT ATCCTACATA 005360 005361 TCACCAATGC TTGTTTCTCA ATTTTTGTTT GTCATTACTT TAAGTCTCTT TAATGCATTA GAGTATCCAA GGTTGACAGT 005440 005441 GAAGGGACTG CATTTGGGAG CTATCTGAAG ACAAAAACAG CTTTTTGAAG TTTCTTTCAT ACGTCACCTT ACATGGCCTC 005520 005521 TCGCATTCTC TGTGGAGAAG TTTGTGTAGA TTATTCAGAC TACCGTGCAG TGACTGTGTT GTTTAAAACC TATACATATC 005600 005601 CAAACTCTGT TTTGTGTTCT CTATAACTAG GGCATTAGTC TCCCAATAGT AATCCTGCAT CTTATGCTAT TTAAAGAAGG 005680 005681 TTCCCAGAAT ACAGACATTC TTACTTTTGA ACAATGACTT GGGTAGATTG AGGAAGTGGT TTTAATAATC ACTTTGATAT 005760 005761 ATTTCAAAAT CTGGTTCATT ATTGGTGAGG TGCAGGCCAC CTGGTATTAA TGAAAATGTG TAATTAGGAA CCAGTGCAGT 005840 005841 GGAATCAGAG GCTTGAACAT GACCTAAGGC TTGGTCAAAA GTGGTGATCT GAATGTTCCC TGCTCTCTGT ATGTAACTTT 005920 005921 GTACTTAGTC TTCAGTGGCA GGGTTGCAGC AGAGGCCCAG TAAATATTGT TCATTCAACG TATGAAGGAG AAAATGGAAG 006000 006001 TAAGGCCAAA AATTACTGAT TGTAAACAAA TGAAGCACCA AGTGAATAAA TGTACAAATA GACAAGTAGC CAGTAGGAAA 006080 006081 AAAAACAATA ATTGTTACCT AAAGAATGAA AACCAAGTGG AAAAGGCCGC CAGGGACATT TTAATATGCA TATTGTTGCT 006160 006161 TTCACATATA ATACAGTAAG GGAGTATCAG AAAACCTGAA TCTGCCTGAC TAAAACATAC CCTGTTCCAC AAAGCTATAT 006240 006241 ATATGAGAGT ATTGAAGGTG GTTTAATACC AAATTCAAAA ATTCAGCCTC AGTGTAGCAA ACTTTTAAAT TTTCCATGAT 006320 006321 ATAAAGTAAG TTTTAACCAA CAATGGAAGT CACAGCACTA AAGTACATTA CTATTATATG ATTCTCTGAT GGTAATAGAA 006400 006401 ACTGTGCTGC AGGACACGTT TTGATTCAGG AAGAAATGTG GAGTAACTCC ACAGAGGAAT TCATCCTTTC TAAGTTTAAA 006480 006481 TCTGAACGGA ACCCATATGC CCATACCCTG AAGATGCATG TAAGGGAACA ACATGGCTTG GTCTGTTGAA AAAAGAAAAG 006560 006561 AACCTTCAAT TAAGCATTCT GTGAACTTGA TAAGAGGATG CAGAGGAACG TAAATGCACT CTGCATATCT GTGATTGACC 006640 006641 TTGGAACACA GTGATTGCCC TCTAAAGAAT AGCCGAGTAA GTACTGTTAT CATTCCACCG ATCAAATTAG AGCCTCTTCC 006720 006721 TTCCAGTGGG AGCAGAGTGA CATAGACCAA GGAAAGCCGA GGAGAAGATT GTAGCCTTTT ATTTCTCCTT ATATTTGTTG 006800 006801 AGGTTCACTG CTGACTGATA AACGATTTGC ACAAAAAAAT TCAGGCCTCT GACTCTTCTG GTATTTGATT TATCTAGTAA 006880 006881 AGTTAATTCC AAGACAAAAG TACAGTTGGT TAAAAATACC AGTCTCATGT TTATTTGATG GTTTGAAATA TTCTGTTACA 006960 006961 TTGTTGTATC TCGTTTGTCA CCTTGGAATA TATGACAATC ATGTTATCTT GATTTTTTCC ACAAGATAAT TTGATTCTAA 007040 007041 AATCGATTCA TTGTTTATCT TCAGGAATTA GAGATTTTAA AAATGTCATC TCATGTCTCA TTCAGTCATT TCCAAGATTT 007120 007121 AGCGAGTGTT CTCCCTAATG CCTTGGATAA GAATGCCTTG TTCAATGGCT GTATTTTACT CATAATTAGC ATTCCAACTG 007200 007201 CTT |