NONHSAT053746

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT053746

Source

NONCODE4.0

Same with

,

Classification

sense

Length

856 nt

Genomic location

chr17+:40812278..40813409

Exon number

2

Exons

40812278..40812380,40812657..40813409

Genome context

Sequence
000001 TACCTGTCGG AACATGGAGG AGGAGCTGGC AACAACTGGG CCAGCGGATT CTCCCAGGTG TCCTAGCGAC CATTCCAGAG 000080
000081 ACCTTTGATA TTCCCATCCA GAGGGTGAGA AAATTCATGA AGACATCTTT GACATCATAG ACCGAGAAGC AGATGGAAGT 000160
000161 GACAGTTTGG AGGTGAAGTT ATGGAGTGGG GGAAGGAATG GGCAGGGAGG CCGAAGAGTG CTGGGGACAG GTCAGGAGGT 000240
000241 GGCCTGGATA GGTAATATGA GGGGAGCAat tcaattcaaa acccgtttat ggagcatcag atgtgggata ttgaggtgaa 000320
000321 taagatataa tctttgttct caaggaagtc ataaatctga atggCACCGG CCCCTTAGGC ATGAGTCATT CAGCTGCTTC 000400
000401 TCCAGCTCCA AACCTTCCCA AGGAGCCTCA GCCTGGATGC ATAAGAGGAA GCTTTGAGAC ATTGGCGTTT TGGGAATGGA 000480
000481 GAATGAACCA AGCCGAAGTC TCTCCCCCAG ATCCTTGGAG ACTGCCTCTC CATCTCTCCC CATGCTGGGT GCGATATgtt 000560
000561 cctggcttac agctcttata acccatgtaa tttcctaagg gactagagca ataatagtat gttttgttaa aatatttgac 000640
000641 cttttgtcct tggtttctga aacagctcca gaacagctcc agagtgataa aggtgaaaga cagtcttttg ttATTTATAA 000720
000721 CAAGCCCGTT TCTTTTAGTT TAATCTTTCA TTTTATTTTA ATTAGTTAAT TTTACTAACC ACTGTACTAA GGAGGAACAA 000800
000801 GTGCCTTTCA ACCAAACCTG AGCttatgtt aaagaggcga tttttggaaa gtccca
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Predicted Small Protein

Name NONHSAT053746_smProtein_380:580
Length 67
Molecular weight 7494.5731
Aromaticity 0.106060606061
Instability index 61.4136363636
Isoelectric point 6.70050048828
Runs 7
Runs residual 0.0445472690982
Runs probability 0.0392283039341
Amino acid sequence MSHSAASPAPNLPKEPQPGCIRGSFETLAFWEWRMNQAEVSPPDPWRLPLHLSPCWVRYV
PGLQLL
Secondary structure LLLLLLLLLLLLLLLLLLLEELLLHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLEEEEL
LLLLLL
PRMN -
PiMo -