NONHSAT055363
Revision as of 17:38, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
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===Functio...")
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT055363 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1069 nt |
Genomic location |
chr17+:63096935..63107178 |
Exon number |
4 |
Exons |
63096935..63097160,63097325..63097414,63101389..63101796,63106834..63107178 |
Genome context |
|
Sequence |
000001 GGAGGCGCCT AGTGAGGGTC AGGGAGGCCC GGCCCGCGCC CTCCCCGCCC AGCCGCCTCC CCGTCGACCA CCCAGGGCTG 000080
000081 GGGCGAGCCA GGCTGCCTTT CGAACTTGGG GGCTTCTCCT CTTGTCTCCC ACTGGTGCTC TGGCCGTGAA TCCATCCAGG 000160 000161 CGCCAGGAGA TGACAATCCG GTACCAAGGC CGGCAGTACA GGCTGAGGAT GGCATTTCTC CAAAAGGTTT CCAAGCTGCG 000240 000241 TCCTGGGCCT GGAGACTGAG ACAGAGATCC ACGGACTGCA GTGCAGGCAG CCCACCCCAG ATCCGAGTCA TATAAGTTTT 000320 000321 TTTTCCCCCG ATGGAGTGAA GTGGTGCGAT CTTGGCTCAC TGCAACCTCC ACCCCCGGGT TCAAGCGATT CTCCTGCCTT 000400 000401 AGCCTCTGGA GTAGCTGGAA TTACAGGTGC CTGCCACCAT GCCTGGCTAA TTTTTATATT ATTAGTAGAG ATGGGGTTTT 000480 000481 GCCATGTTGG CCAGGCTGAC CTCGAACGCC TGACCTCAGG TGATCCACCC GCTTTGGCCT CCCAAAGTGC TACGATTATA 000560 000561 GATGTGAGCC ACCGTGCCCA GCCCAGTGAT GACCCTTTTA TGTAGCATTT GTTTGAGGCC TCAGGAAATA GTTGTGGAGA 000640 000641 AGTCAGGATT CTGGGAGAAC TGGGCAGCTG TGCTCTGGTA AACAGTGGTG GGGTGGGGTG GGGAGGTGAT GGTATGGGGA 000720 000721 AGGAGTTGAA ATATCAGTAA AAAACATGCA GACCCAAAGA TGGGGACCAA AATCCAAAGC CAGAGGGTCC TGGAAATCAG 000800 000801 AGGGTCTTAC AACATAACAG GCAGTACAGG CCATGGCTCA GGCTAGGCGT GGAACAGACT GCAGTTCTCT TCTACAAATC 000880 000881 AATCTAGACT GGACAGACAG AACTCCAAGG GAGGAAAGAA AAATGAATCT GATGTTACTT CTTGAAACCA CATTTTCTGA 000960 000961 AGTCACCATT TTTATGTATC TATCAACTCA TCATTTTTAT GTATATATCA ATATGATTTT ATGATCTTAT TTTTTCCTAC 001040 001041 TAATGTGATG AATTACCTTG ATTGATTTT |
Predicted Small Protein
Name | NONHSAT055363_smProtein_470:604 |
Length | 45 |
Molecular weight | 4670.1349 |
Aromaticity | 0.0454545454545 |
Instability index | 49.5727272727 |
Isoelectric point | 4.44256591797 |
Runs | 7 |
Runs residual | 0.00401069518717 |
Runs probability | 0.0412976001212 |
Amino acid sequence | MGFCHVGQADLERLTSGDPPALASQSATIIDVSHRAQPSDDPFM |
Secondary structure | LLEEELLLLLHHHHLLLLLLLLLLLLEEEEEELLLLLLLLLLLL |
PRMN | - |
PiMo | - |