NONHSAT063812
Revision as of 17:59, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
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===Functio...")
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT063812 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1110 nt |
Genomic location |
chr19-:22798359..22806773 |
Exon number |
2 |
Exons |
22798359..22799355,22806659..22806773 |
Genome context |
|
Sequence |
000001 GGTTGGCAGC CTGGAGTCTG GAGTGCAGGT GCCGGGCAGG CAGCACTGGG AGCGCTCGGC GACTTGGCTG GAGGCCGAAG 000080
000081 GTGCCGCCCC TCGGGGACCA GAGCGTCTTT GCAAGCGTGG TTGGGGAACT CCAGAGTCCC ACATCACAGT TCAGCATGTG 000160 000161 CCTCAGGAGC TTCAGCAAGT CTTTCGTGGA AGGAGAGTCT GCCGGTGACG GGGGAAGCAG GCCATCAGCC CGCCCAGCTT 000240 000241 CATCTCAGGC CGCTTCCAAC ACCGCCAAGC AAACTCCCTT GGCAAGATCC ATGCAAGGCC GCGGCTGACC ACCGGGAGGC 000320 000321 AGCAGCCTAC TCTGCAAGGC ACTTTCTTTA CCCGACCCCC ACCCCCTTTT AACAGGTGGC AGGAAACCTG CTGGCCCAGC 000400 000401 CATCTGCCGC ACCCACCCTT CACTCCCAGT CCCATCTCCC CATAGCACAG ATTTCCCTAT CATGAGCCCT GACGTGACCT 000480 000481 GGGTGTCCTC TTGCCTTCCT CTGCCCAAGG AATTCCTACA GAGATTCTTT CTCTATCCTC CTTTGTACAT TTCCAAGGAA 000560 000561 TTGTTTCCCC AGGGCCCCTC CCCTTGAAGA AATTAGACAG GAAGCTGGAG TAGATGGTTC CCTCTTTCCC ACCTCTCACA 000640 000641 CTCCCAAGCT CTGGTTAACT CTCTGTGGGC CAGTGGCTAG ATTCCCCAAC ACAGATGACA ACTGAACAAT ACACATGCAG 000720 000721 CGTAAGAATG TTGTCGCTGC CACCAGCCAC TTACAGATAC ACCATTGCTA AGGTCCACCC AACTGGACTG TTTCCCCCTC 000800 000801 CCATAGACTA AGCCCCAAAG GCCAAAAAGT AAAACCCGCT ACCCCAAACC TGCCTGTAAC TGTTTGACCA GAGGCCAGCT 000880 000881 GTCCCAGGAT GCGGTTAAGA CGTCTACTTT GCACAAGAGA ACTGGCAAGA AAAACATCTC CAGGAAGCGG TCAGACACAT 000960 000961 GGCACAAAGG ACCCCCCCCC TTTTCTTTTT CCTTCACCCT GATCCAGTTC TATGTCCTAT AAAACCTTGC TCTAGCCTAT 001040 001041 AAGTGGGGCT GCCTTCTCTG CTTTTGTCAA GAGGTAGCCA GGCAGGACTG ACAATAAATC AGCTTGCCTG |
Predicted Small Protein
Name | NONHSAT063812_smProtein_155:307 |
Length | 51 |
Molecular weight | 5116.6022 |
Aromaticity | 0.04 |
Instability index | 66.68 |
Isoelectric point | 10.7940063477 |
Runs | 9 |
Runs residual | 0.0153216374269 |
Runs probability | 0.0434650336611 |
Amino acid sequence | MCLRSFSKSFVEGESAGDGGSRPSARPASSQAASNTAKQTPLARSMQGRG |
Secondary structure | LEEEEELLLEEEELLLLLLLLLLLLLLLLLHHHLLLLLLLHHHHHHLLLL |
PRMN | - |
PiMo | - |