NONHSAT068786

From LncRNAWiki
Revision as of 18:13, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here. ==Annotated Information== ===Transcriptomic Nomeclature=== Please input transcriptomic nomeclature information here. ===Functio...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT068786

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

627 nt

Genomic location

chr2-:4655665..4668820

Exon number

2

Exons

4655665..4655855,4668385..4668820

Genome context

Sequence
000001 TTTTTATGGC TGCATAGTAT TCCATGGTGT ATATGTGCCA CATTTTCTTA ATCCAGTCTA TCGTTGTTGG ACATTTAGGT 000080
000081 TGGTTCCAAG TCTTTGCTAT TGTGAATAGT GCCGCAATAA ACATATGTGT GCATGTGTCT TTATAGCAGC ATGATATTAA 000160
000161 ATACCATGAA AATGTACATA GTTGTTTTAG TGGATATCCC CAAAAATATA ATGTGGTACC AATTCCCAAA GTCTAGATCC 000240
000241 CTGGAAATTT GAATAGGATG CTTTACAATA ACTAGATAGG ATCTTTTATC TTAAGAAATT GTATAGAAAA TATTTGTTGA 000320
000321 AAGATATACA TTCAGTGAAC AGAATAAAAT CAAGAACACT TGGTGCTTTG AAAACCATGT CACGGCTGGG CGCGGTGGCT 000400
000401 CACGCCTGTA ATCCCAGCAC TTTGGGAGGC TGATGATTTT GCTTAGTTAC ATTCTTAAAA CTCCCAATCA TAAACAAGAA 000480
000481 ATACATGTAA TTAAAATTTA GATAATAATA TTTAAGACGG TTGTTATAAA GAACAACTAT ATTACATAAA ATATTAAATT 000560
000561 ATACATTATT AGATAAATAC ATTTTTATTA TGTCAATCAG GATTTAGATT TATCACTATT ACCTACT
[back to top]

Predicted Small Protein

Name NONHSAT068786_smProtein_23:145
Length 41
Molecular weight 4474.3827
Aromaticity 0.125
Instability index 52.9025
Isoelectric point 6.79632568359
Runs 9
Runs residual 0.0469758064516
Runs probability 0.0239160729357
Amino acid sequence MVYMCHIFLIQSIVVGHLGWFQVFAIVNSAAINICVHVSL
Secondary structure LEEEHHHHHHHHHHHHLLLHHHHHHLHHHHHHEEEEEELL
PRMN LLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLL
PiMo ooooooTTTTTTTTTTTTTTTTTTTTTTTTTiiiiiiiii