NONHSAT078171
Revision as of 18:50, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
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===Functio...")
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT078171 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
536 nt |
Genomic location |
chr20+:2187756..2193796 |
Exon number |
2 |
Exons |
2187756..2188165,2193555..2193796 |
Genome context |
|
Sequence |
000001 GGGAGAGTCT CTGCGTCCTC CAGCCCCCGC TTCCCTTCAT GTCGGAGGTC CTAAGCCCGC AGCGAAGTCC GCAAAGAGCT 000080
000081 TTCCCCGACG CCTACGAGAC CGGAAGTGCC TGGGCCCAGG TGGAGGAAGG ACCCGCGTGG CCGCCTCCGC GCTCTCCCTG 000160 000161 GGGTCCGTGC CCCTTCCGGC GTTTCTCCCG CGTCCTTCAC CATGGCAACT CGGGCGTCGG GAGCGTGGGC TGCGAGCCGA 000240 000241 GTGGGTGGGG GAGCCGCCGG GCTCTATCCG CCAGCCCACG AGAAGTGACG CAGGAGCACC ATTGAAGGAG AATTAGACAA 000320 000321 ACTGGAGTCT ACTGAGATGA GGCTGTTGGG AATGGCCCTG GTACCACATC CTGAGCAGGG ATGGCCGATG GAATGGGGAG 000400 000401 AAGACTCAGG TGGGGCTTGA GTGTGTCCTC TGATGACTGA AGAGCCTTGG GAGCAAGCAT CCTTCCTGCT ACTGTGTGTT 000480 000481 TGCTGGTTCC AATGATACAT AATTTGTGCT TTTCGTAATT AAAGTATTAT CCTGTA |
Predicted Small Protein
Name | NONHSAT078171_smProtein_38:304 |
Length | 89 |
Molecular weight | 9662.5482 |
Aromaticity | 0.0909090909091 |
Instability index | 76.3556818182 |
Isoelectric point | 7.90924072266 |
Runs | 15 |
Runs residual | 0.0390909090909 |
Runs probability | 0.0340340340341 |
Amino acid sequence | MSEVLSPQRSPQRAFPDAYETGSAWAQVEEGPAWPPPRSPWGPCPFRRFSRVLHHGNSGV GSVGCEPSGWGSRRALSASPREVTQEHH |
Secondary structure | LLEELLLLLLLLLLLLLLLLLLLEEEEELLLLLLLLLLLLLLLLLLLEEEEEEEELLLLE EEELEELLLLLLEEEEELLLHHHHHLLL |
PRMN | - |
PiMo | - |