NONHSAT081283
Revision as of 19:01, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
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===Functio...")
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT081283 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
overlapping(S),antisense |
Length |
615 nt |
Genomic location |
chr21-:18906251..19047217 |
Exon number |
3 |
Exons |
18906251..18906482,19032113..19032214,19046937..19047217 |
Genome context |
|
Sequence |
000001 CTTTCATTTG GAAGTTTCTA ATGCAAGCTA ATTTTGTGAG AAAAAACTCT CACATCATGT ATCTGCCCAT TTTAGAGGAA 000080
000081 GGATAAGCAT ATGGTACAAC ATCAGTGGAT GGAACAGAAG CCGCAACTAG TTGAGGGTAT TTCCTTGCCT ACAGCTCCAT 000160 000161 CAAGCATTAA GAGAGACTTT CCAGGCCAGC TCCAGATGAA AAGTGCTTAT TTCAGAATCT TTATTTTGGG GGTCTGTGCC 000240 000241 ATTATGTCAA GATTCTAAAA CTCAAAATTG GAGCCTGAAA AGTCATGTCT CTCGCTATGA GAGTGTTGGG GCTCAGAAAG 000320 000321 CGATACCCCA AAGACTGGTG CTTTGAAATG TTGAGAGGAC TTAGAAGCTG CCTCAGAATC AAGCTGCACT CCAGCCTGGG 000400 000401 TAACAGAGCG AGACTCCATC TCAAAAAAAA AAAAAAAAAA AAAAAAATAT ATATATATAT ATATATGTGT GTGTGTGTAT 000480 000481 ATATATAGCT ATATATATGT GTATATATAT ATATATAGCT ATATATATAT ATATATATAT TGCTGAGAAA GAGAAGAAAA 000560 000561 TACAGGGAAG TAGAAATTAT GCTCTTCATT GTCTAGGAGT TTTAGTTCTT TAATT |
Predicted Small Protein
Name | NONHSAT081283_smProtein_284:487 |
Length | 68 |
Molecular weight | 8150.0752 |
Aromaticity | 0.10447761194 |
Instability index | 45.1164179104 |
Isoelectric point | 10.4638061523 |
Runs | 11 |
Runs residual | 0.0208642650621 |
Runs probability | 0.0288898524193 |
Amino acid sequence | MSLAMRVLGLRKRYPKDWCFEMLRGLRSCLRIKLHSSLGNRARLHLKKKKKKKKIYIYIY MCVCVYI |
Secondary structure | LLHHHHHHHHHHLLLHHHHHHHHHHHHHHHHEEHHHHLLHHHHHHHHHHLLLLLEEEEEE EEEEEEL |
PRMN | - |
PiMo | - |