NONHSAT084431

From LncRNAWiki
Revision as of 19:11, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here. ==Annotated Information== ===Transcriptomic Nomeclature=== Please input transcriptomic nomeclature information here. ===Functio...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT084431

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

552 nt

Genomic location

chr22-:25949258..25950618

Exon number

3

Exons

25949258..25949595,25950191..25950269,25950484..25950618

Genome context

Sequence
000001 TGTTTCACCT CTTCCTCAGA AGTGCAGGGA ACAGTGTGTG CTATGCAAAT AGATGCCACA TACAGATGGT AACTTGTTGG 000080
000081 GCTAATTGGC TGGGGGCAAA GGCTCTCTGG GGCTCACCCA GGGATGGTGT ATTTGCCAAG ACTGGAATTA CAATCCCGAT 000160
000161 GTCATGGGAT GTTTGGCTCA GAAAGCCTTC ATCTGCTTGT CATGAGTTAT GGGACCTCAG CCTCCCAAAG TATTGGGATT 000240
000241 ACAGGTGTGA GCCACCACAT GTAGCCTAGA GTTGAGACTT TTAATTCCAC CCCTTAGCCT CTGAGGAGCA GAGAGGGGCT 000320
000321 GACGGGTGAG TTGACTACCA ATGGCCAGTG ATTTAATCAA TCATGCCTAT AGAATGAAGC CTCCAGATAA ATGCAGAAAA 000400
000401 ACCAAGTGGG TTCAGAGAGC TTCCATATAG CTGAACACAT GGAGGTCCTG TAGTATGGTG TGCTCAGAGA GAGCAGAGAT 000480
000481 GCTCCTAGCC CCAGGACTTG CCCTATGCAT CTCTTCCACC TGGCTGCTCA TCTGTATCTT TTGTAATACC CT
[back to top]

Predicted Small Protein

Name NONHSAT084431_smProtein_65:268
Length 68
Molecular weight 7732.8774
Aromaticity 0.149253731343
Instability index 47.6402985075
Isoelectric point 7.74102783203
Runs 11
Runs residual 0.0208642650621
Runs probability 0.0475984005396
Amino acid sequence MVTCWANWLGAKALWGSPRDGVFAKTGITIPMSWDVWLRKPSSACHELWDLSLPKYWDYR
CEPPHVA
Secondary structure LLLHHHHHHHHHHHLLLLLLLEEELLLEEEELLLLEELLLLLHHHHHHHHLLLLLLLLLL
LLLLLLL
PRMN -
PiMo -