NONHSAT087874
Revision as of 19:19, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
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===Functio...")
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT087874 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1107 nt |
Genomic location |
chr3-:10064611..10068010 |
Exon number |
2 |
Exons |
10064611..10065431,10067725..10068010 |
Genome context |
|
Sequence |
000001 CACCGCTGCA GCAGAGTTCT GTGCTAGCCG GGCATAGGGG CGAGAGAAGG CCCAGAGGCG ACGTCAGAGA GAAGCAACTG 000080
000081 CGCCCCGGTG AAGAGAAGCT CGCCCATCAC CGGCTGGGAG CCAGCTTTCA GTGAAGATGG CAGGGCCAGA ACTGTTGCTT 000160 000161 GACTCCAACA TCTGCCTCTG GGTGGTCCTA CCCATCGTTA TCACTCTTCG TAGACATGAT CCGCCACTAC GTGTCCATCC 000240 000241 TGCTGGAGAG CGACAAGAAG CTCACCCAGG AACAAGTATC TGACAGGGGA CGAGGCACCC ACAGTCCCTC TCCCATAAGC 000320 000321 CTGCCAAGAA GATTGATGTG GCCCGTGTAA CCTTTGACCT GTACAAGCTG AACCCACAGG ACTTCATTGG CTGCCTGAAC 000400 000401 ATGAAGGCGA CTTTTTATGA TACGTACTCC CTTTCCTATG ATCTGCACTG CTGTGGGGCC AAACGCATCA TGAAGTGAGC 000480 000481 AAATTGGGGT TTCCTGGGGA CAAGGTGGGT ACGGGCAATG GGAGAGCCCC TGTCTGTTCA CATGGACTCA GCCTTCTCAG 000560 000561 CACCTGGGTC TGGCTTTGGT GCTGACAAAG CATAGCCTGT ATCAGACAAC ACGGAGCCTG ATGGGCTCTC GAAGTGCTGT 000640 000641 GGACAACACT GGCGTGTGCC CAGGGGTGCA CATGTTCCTC CTGGTGGAAC CTGGATGCAT TTTATTTTTA TGACTACTTT 000720 000721 CCACTCTAGC AACTACATTT TTTCATTGAA ATAGGAAGTT TTCCTAAGTA GTCTTCTAGT CAGTTTTTTA aaaatgaaca 000800 000801 tgtgttggcc aggcatagtg gctcacgcct ctaatcccag cactttggga ggccaaggtg ggtggatcac ttgaggtcag 000880 000881 gagtttgaga ccagcctggc caacatggca aaacccaatc tctacaaaaa ttagctggac atggcagtgc atgcctgtaa 000960 000961 tcccaactac tcaggagcct gaagcaggag aatcgtttga acccaggagg tggaggtgac agtgaggcga gattgtgtca 001040 001041 ctgcactcca gcctgggcaa aacagcaagt gtcttaccaa aaaaaaaaaa aaaaagtatg tgtcaaa |
Predicted Small Protein
Name | NONHSAT087874_smProtein_215:349 |
Length | 45 |
Molecular weight | 5115.8921 |
Aromaticity | 0.0454545454545 |
Instability index | 71.2659090909 |
Isoelectric point | 10.2461547852 |
Runs | 5 |
Runs residual | 0.0494652406417 |
Runs probability | 0.0468291821233 |
Amino acid sequence | MIRHYVSILLESDKKLTQEQVSDRGRGTHSPSPISLPRRLMWPV |
Secondary structure | LEEEEEEEEEELLLHHHHHHHLLLLLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |